RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 POC1BQ8TC44 478 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 ACTRT2Q8TDY3 377 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 CPNE4Q96A23 557 aaPredicted RBP16.79■□□□□ 0.28
SORT1-203ENST00000471996 PHF21BQ96EK2 531 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 SRXN1Q9BYN0 137 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 HHATLQ9HCP6 504 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 VPS29Q9UBQ0 182 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 POU2F3Q9UKI9 436 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 C19orf53Q9UNZ5 99 aaPredicted RBP16.79■□□□□ 0.28
SORT1-203ENST00000471996 MGAT4BQ9UQ53 548 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 SNX24Q9Y343 169 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 PSMG1O95456 288 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 APEHP13798 732 aaKnown RBP16.78■□□□□ 0.28
SORT1-203ENST00000471996 ITGA2P17301 1181 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 HEPACAMQ14CZ8 416 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 ZNHIT3Q15649 155 aaPredicted RBP16.78■□□□□ 0.28
SORT1-203ENST00000471996 CR1LQ2VPA4 569 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 SLC22A25Q6T423 547 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 FCRLAQ7L513 359 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 P2RY8Q86VZ1 359 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 DEPDC4Q8N2C3 294 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 SLC35F6Q8N357 371 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 CDYL2Q8N8U2 506 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 OR2W6PQ8NHA6 318 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 BBS4Q96RK4 519 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 SNX6Q9UNH7 406 aa16.78■□□□□ 0.28
SORT1-203ENST00000471996 ALG1L2C9J202 215 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 UPK1AO00322 258 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 EIF3HO15372 352 aaKnown RBP eCLIP16.77■□□□□ 0.28
SORT1-203ENST00000471996 LY6HO94772 140 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 PGM3O95394 542 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 TGFAP01135 160 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 IGKV1D-16P01601 117 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 GSTA2P09210 222 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 EGR1P18146 543 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 GGT1P19440 569 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 SHC1P29353 583 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 SFTPDP35247 375 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 NR4A2P43354 598 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 OR3A2P47893 321 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 ZNF41P51814 821 aaPredicted RBP16.77■□□□□ 0.28
SORT1-203ENST00000471996 MANFP55145 182 aaKnown RBP16.77■□□□□ 0.28
SORT1-203ENST00000471996 TECRLQ5HYJ1 363 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 LETMD1Q6P1Q0 360 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 TMEM108Q6UXF1 575 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 B3GLCTQ6Y288 498 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 LMF2Q9BU23 707 aaKnown RBP16.77■□□□□ 0.28
SORT1-203ENST00000471996 SHCBP1LQ9BZQ2 653 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 PRSS50Q9UI38 385 aa16.77■□□□□ 0.28
SORT1-203ENST00000471996 MYO1GB0I1T2 1018 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 NDUFS8O00217 210 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 STX16O14662 325 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 PCDH7O60245 1069 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 SLITRK5O94991 958 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 DHRS4L1P0CG22 281 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 BMP4P12644 408 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 PDLIM4P50479 330 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 RAE1P78406 368 aaKnown RBP16.76■□□□□ 0.27
SORT1-203ENST00000471996 SLC18A2Q05940 514 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 SPOCK1Q08629 439 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 FAM174BQ3ZCQ3 159 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 ZNF544Q6NX49 715 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 TMEM107Q6UX40 140 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 LRRC8AQ8IWT6 810 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 OR2L13Q8N349 312 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 C16orf78Q8WTQ4 265 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 ZMYND19Q96E35 227 aaPredicted RBP16.76■□□□□ 0.27
SORT1-203ENST00000471996 BCO1Q9HAY6 547 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 C3orf14Q9HBI5 128 aa16.76■□□□□ 0.27
SORT1-203ENST00000471996 DMGDHQ9UI17 866 aaKnown RBP16.76■□□□□ 0.27
SORT1-203ENST00000471996 A0A096LPK6 155 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 IGHV4-61A0A0C4DH41 118 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 GNG14A0A1W2PPG7 69 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 GXYLT2A0PJZ3 443 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 OR5H1A6NKK0 313 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 PPP6CO00743 305 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 KCNH1O95259 989 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 OTCP00480 354 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 JUNP05412 331 aaKnown RBP16.75■□□□□ 0.27
SORT1-203ENST00000471996 COX5AP20674 150 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 IGHV1-2P23083 117 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 PTAFRP25105 342 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 GABRA3P34903 492 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 NCBP2P52298 156 aaKnown RBP eCLIP16.75■□□□□ 0.27
SORT1-203ENST00000471996 TCHHL1Q5QJ38 904 aaPredicted RBP16.75■□□□□ 0.27
SORT1-203ENST00000471996 MROH9Q5TGP6 573 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 FAM219BQ5XKK7 198 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 SLC43A2Q8N370 569 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 OR4C3Q8NH37 302 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 SGMS2Q8NHU3 365 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 C3orf49Q96BT1 292 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 KLHDC3Q9BQ90 382 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 PIMREGQ9BSJ6 248 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 DDX18Q9NVP1 670 aaKnown RBP16.75■□□□□ 0.27
SORT1-203ENST00000471996 ING1Q9UK53 422 aaPredicted RBP16.75■□□□□ 0.27
SORT1-203ENST00000471996 TMCO1Q9UM00 188 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 PMF1-BGLAPU3KQ54 211 aa16.75■□□□□ 0.27
SORT1-203ENST00000471996 ESYT3A0FGR9 886 aa16.74■□□□□ 0.27
SORT1-203ENST00000471996 HMX2A2RU54 273 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms