RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZBTB8AQ96BR9 441 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 SH3YL1Q96HL8 342 aaPredicted RBP20.24■□□□□ 0.83
C9orf3-213ENST00000471978 NPAS1Q99742 590 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 BTBD2Q9BX70 525 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 NEUROD4Q9HD90 331 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 MED17Q9NVC6 651 aa20.24■□□□□ 0.83
C9orf3-213ENST00000471978 C16orf97H3BN30 126 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 HSPA4LO95757 839 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 OPN1LWP04000 364 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 LAMP1P11279 417 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 CCKARP32238 428 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 SLC6A8P48029 635 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 LASP1Q14847 261 aaKnown RBP20.23■□□□□ 0.83
C9orf3-213ENST00000471978 PTGR1Q14914 329 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 ATP6AP1LQ52LC2 224 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 CPTPQ5TA50 214 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 OR10D3Q8NH80 312 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 CDS1Q92903 461 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 C3orf30Q96M34 536 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 RNF145Q96MT1 663 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 C1orf50Q9BV19 199 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 DLL4Q9NR61 685 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 DUSP22Q9NRW4 184 aa20.23■□□□□ 0.83
C9orf3-213ENST00000471978 UQCRHLA0A096LP55 91 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 C7orf72A4D263 438 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 DEFB108AA8MXU0 73 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 SIAH2O43255 324 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 PLGP00747 810 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-213ENST00000471978 ARRB2P32121 409 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 SERPINB5P36952 375 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 CD226Q15762 336 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 PLPPR5Q32ZL2 321 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 C6orf136Q5SQH8 315 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 ZNF550Q7Z398 422 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 WFDC11Q8NEX6 87 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 B4GALNT2Q8NHY0 566 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 OR5P2Q8WZ92 322 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 STACQ99469 402 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 ROPN1BQ9BZX4 212 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-213ENST00000471978 PIGUQ9H490 435 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 ROPN1Q9HAT0 212 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-213ENST00000471978 ATAD3AQ9NVI7 634 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 BEX4Q9NWD9 120 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-213ENST00000471978 PAQR5Q9NXK6 330 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-213ENST00000471978 ZDHHC2Q9UIJ5 367 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 MCTS1Q9ULC4 181 aaKnown RBP20.22■□□□□ 0.83
C9orf3-213ENST00000471978 EMC9Q9Y3B6 208 aa20.22■□□□□ 0.83
C9orf3-213ENST00000471978 A0A1W2PQD3 144 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 SKAP2O75563 359 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-213ENST00000471978 LYPLA1O75608 230 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-213ENST00000471978 FOSL1P15407 271 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 CRYGSP22914 178 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 PSMA4P25789 261 aaKnown RBP20.21■□□□□ 0.83
C9orf3-213ENST00000471978 CCT3P49368 545 aaKnown RBP20.21■□□□□ 0.83
C9orf3-213ENST00000471978 RAC1P63000 192 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 EXOC3L2Q2M3D2 409 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 CTU2Q2VPK5 515 aaKnown RBP20.21■□□□□ 0.83
C9orf3-213ENST00000471978 IL23RQ5VWK5 629 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 FNDC5Q8NAU1 212 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 PIK3IP1Q96FE7 263 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 GMPPAQ96IJ6 420 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-213ENST00000471978 ADGRG7Q96K78 797 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 KLHDC3Q9BQ90 382 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 KLHL4Q9C0H6 718 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 TMEM185BQ9H7F4 350 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 GIN1Q9NXP7 522 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 CLEC4AQ9UMR7 237 aa20.21■□□□□ 0.83
C9orf3-213ENST00000471978 TNFSF11O14788 317 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 ADAMDEC1O15204 470 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 CXCL13O43927 109 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 SYNGR4O95473 234 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 CREB1P16220 341 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 ATP6V1C1P21283 382 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 ME2P23368 584 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 HOXC12P31275 282 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 CTBP2P56545 445 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 TP53BP2Q13625 1128 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 SPDYE7PQ495Y7 208 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 CDC73Q6P1J9 531 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 ESPNLQ6ZVH7 1005 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 KRTCAP2Q8N6L1 136 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 NATD1Q8N6N6 113 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 OR56A1Q8NGH5 318 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 OR6K3Q8NGY3 331 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 OR2V1Q8NHB1 315 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 PSMA8Q8TAA3 256 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 POC1BQ8TC44 478 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 NUDT8Q8WV74 236 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 ZC3HAV1LQ96H79 300 aaKnown RBP20.2■□□□□ 0.82
C9orf3-213ENST00000471978 PRPF18Q99633 342 aaKnown RBP20.2■□□□□ 0.82
C9orf3-213ENST00000471978 ACTRT3Q9BYD9 372 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 CXorf36Q9H7Y0 433 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 PLSCR4Q9NRQ2 329 aa20.2■□□□□ 0.82
C9orf3-213ENST00000471978 FAF1Q9UNN5 650 aaPredicted RBP20.2■□□□□ 0.82
C9orf3-213ENST00000471978 SS18L1O75177 396 aaPredicted RBP20.19■□□□□ 0.82
C9orf3-213ENST00000471978 C6orf47O95873 294 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 BPGMP07738 259 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 LSM12Q3MHD2 195 aaKnown RBP20.19■□□□□ 0.82
C9orf3-213ENST00000471978 PDSS1Q5T2R2 415 aa20.19■□□□□ 0.82
C9orf3-213ENST00000471978 ANKRD34AQ69YU3 496 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms