RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.26
HOXB3-206ENST00000471459 NUDT14O95848 222 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 TGM6O95932 706 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 AGR2O95994 175 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 AK1P00568 194 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 EPXP11678 715 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 MATN1P21941 496 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 EIF1P41567 113 aaKnown RBP13.45□□□□□ -0.26
HOXB3-206ENST00000471459 CLDN15P56746 228 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 HBA1P69905 142 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 MPP2Q14168 576 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 DPY19L1Q2PZI1 675 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 ATAD3BQ5T9A4 648 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 PPP4R4Q6NUP7 873 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 C6orf120Q7Z4R8 191 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 OR8J2Q8NGG1 315 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 OR4A15Q8NGL6 344 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 OR5AK3PQ8NH89 298 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 ARL8AQ96BM9 186 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 SH3YL1Q96HL8 342 aaPredicted RBP13.45□□□□□ -0.26
HOXB3-206ENST00000471459 SLC39A3Q9BRY0 314 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 EXD2Q9NVH0 621 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 THAP1Q9NVV9 213 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 FBXO34Q9NWN3 711 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 HAO1Q9UJM8 370 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 MCTS1Q9ULC4 181 aaKnown RBP13.45□□□□□ -0.26
HOXB3-206ENST00000471459 EXPH5Q8NEV8 1989 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 ADGRG4Q8IZF6 3080 aa13.45□□□□□ -0.26
HOXB3-206ENST00000471459 A0A1W2PNV4 684 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 TMEM120BA0PK00 339 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 A6NNC1 897 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 B4DXG7 233 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 EIF1AYO14602 144 aaKnown RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 GOSR1O95249 250 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 SYNGR4O95473 234 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 PLGP00747 810 aaPredicted RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 S100A3P33764 101 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 EIF1AXP47813 144 aaKnown RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 ATP12AP54707 1039 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 RAC1P63000 192 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 BST1Q10588 318 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 DAZAP2Q15038 168 aaPredicted RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 PON3Q15166 354 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 GTF2IRD2BQ6EKJ0 949 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 SPATA19Q7Z5L4 167 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 GTF2IRD2Q86UP8 949 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 GTPBP8Q8N3Z3 284 aaPredicted RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 ZNF614Q8N883 585 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 MGARPQ8TDB4 240 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 OR7D2Q96RA2 312 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 SORT1Q99523 831 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 ZBTB18Q99592 522 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 C20orf27Q9GZN8 174 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 CLEC4MQ9H2X3 399 aaPredicted RBP13.44□□□□□ -0.26
HOXB3-206ENST00000471459 FANCFQ9NPI8 374 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 TIGARQ9NQ88 270 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 RASSF1Q9NS23 344 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 MED17Q9NVC6 651 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 PNPOQ9NVS9 261 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 GPATCH2Q9NW75 528 aa13.44□□□□□ -0.26
HOXB3-206ENST00000471459 RNF103-CHMP3A0A140T963 221 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 C7orf72A4D263 438 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 GJE1A6NN92 205 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 A8MXE2 369 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 STX11O75558 287 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 CPSF4O95639 269 aaKnown RBP13.43□□□□□ -0.26
HOXB3-206ENST00000471459 UQCRC2P22695 453 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 KCNJ5P48544 419 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 P2RX1P51575 399 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 HCFC1P51610 2035 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 SUCLG1P53597 346 aaKnown RBP13.43□□□□□ -0.26
HOXB3-206ENST00000471459 SLC18A1P54219 525 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 CLDN20P56880 219 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 MAGOHP61326 146 aaKnown RBP13.43□□□□□ -0.26
HOXB3-206ENST00000471459 LRRC74AQ0VAA2 488 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 KLHL26Q53HC5 615 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 PLXDC2Q6UX71 529 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 C16orf62Q7Z3J2 963 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 ZAR1Q86SH2 424 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 METTL25Q8N6Q8 603 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 TRIML2Q8N7C3 387 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 LINC01560Q8TB33 94 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 RAB3IL1Q8TBN0 382 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 NUDT8Q8WV74 236 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 FIG4Q92562 907 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 TESCQ96BS2 214 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 REXO5Q96IC2 774 aaKnown RBP13.43□□□□□ -0.26
HOXB3-206ENST00000471459 ZNF845Q96IR2 970 aaPredicted RBP13.43□□□□□ -0.26
HOXB3-206ENST00000471459 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 DACH2Q96NX9 599 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
HOXB3-206ENST00000471459 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 EMC9Q9Y3B6 208 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 DTNAQ9Y4J8 743 aa13.43□□□□□ -0.26
HOXB3-206ENST00000471459 H0YC42 278 aa13.42□□□□□ -0.26
HOXB3-206ENST00000471459 HDAC3O15379 428 aa13.42□□□□□ -0.26
HOXB3-206ENST00000471459 PABPC4LP0CB38 370 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms