RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CCDC116Q8IYX3 515 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 TM4SF18Q96CE8 201 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 FAIM2Q9BWQ8 316 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 BCO1Q9HAY6 547 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PFDN4Q9NQP4 134 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 MED17Q9NVC6 651 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 ARMCX1Q9P291 453 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PRSS50Q9UI38 385 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PCDHGB1Q9Y5G3 927 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 IL33O95760 270 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 TACSTD2P09758 323 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 MTHFD2P13995 350 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 ARFIP2P53365 341 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
LSM2-209ENST00000470083 PHC1P78364 1004 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 PPP1R7Q15435 360 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 MST1LQ2TV78 715 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 ARL13AQ5H913 290 aaPredicted RBP10.53□□□□□ -0.72
LSM2-209ENST00000470083 FRG2Q64ET8 278 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 APOOLQ6UXV4 268 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
LSM2-209ENST00000470083 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 SLC43A2Q8N370 569 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 ZNF433Q8N7K0 673 aaPredicted RBP10.53□□□□□ -0.72
LSM2-209ENST00000470083 OR7G2Q8NG99 324 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 OR52N5Q8NH56 324 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 ACTRT2Q8TDY3 377 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 SLC9A6Q92581 669 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 FRG2BQ96QU4 278 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 GPR22Q99680 433 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 IPPKQ9H8X2 491 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 FKRPQ9H9S5 495 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 HHATLQ9HCP6 504 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 MRTO4Q9UKD2 239 aaKnown RBP10.53□□□□□ -0.72
LSM2-209ENST00000470083 PCDHB10Q9UN67 800 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 SLC25A15Q9Y619 301 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 CMYA5Q8N3K9 4069 aa10.53□□□□□ -0.72
LSM2-209ENST00000470083 NPIPA5A0A0B4J1W7 369 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 NPIPA7E9PJI5 369 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 LILRA1O75019 489 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 COQ9O75208 318 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 RGS9O75916 674 aaPredicted RBP10.52□□□□□ -0.73
LSM2-209ENST00000470083 UTS2O95399 124 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 CLDN9O95484 217 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 NPIPA8P0DM63 369 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 EDNRAP25101 427 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 GIFP27352 417 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 SHC1P29353 583 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 SFTPDP35247 375 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 FNTAP49354 379 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 ZNF41P51814 821 aaPredicted RBP10.52□□□□□ -0.73
LSM2-209ENST00000470083 PSMD4P55036 377 aaKnown RBP10.52□□□□□ -0.73
LSM2-209ENST00000470083 RAB10P61026 200 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 GALNT1Q10472 559 aaPredicted RBP10.52□□□□□ -0.73
LSM2-209ENST00000470083 GTF2H2Q13888 395 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 GTF2H2CQ6P1K8 395 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 UGT2A3Q6UWM9 527 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 GOLGA7Q7Z5G4 137 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 CDYL2Q8N8U2 506 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 POC1BQ8TC44 478 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 FBXO17Q96EF6 278 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 JMJD8Q96S16 334 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 PSD2Q9BQI7 771 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 CXorf36Q9H7Y0 433 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 NMRAL1Q9HBL8 299 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 Q9N2J8 555 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 SENP1Q9P0U3 644 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 KLHL9Q9P2J3 617 aa10.52□□□□□ -0.73
LSM2-209ENST00000470083 ING1Q9UK53 422 aaPredicted RBP10.52□□□□□ -0.73
LSM2-209ENST00000470083 SYCE1LA8MT33 242 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 ALG1L2C9J202 215 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 M0R1B8 84 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 RGS14O43566 566 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 RAD51DO75771 328 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 PIAS1O75925 651 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 SNUPNO95149 360 aaKnown RBP10.51□□□□□ -0.73
LSM2-209ENST00000470083 ELK4P28324 431 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
LSM2-209ENST00000470083 ZNF75DP51815 510 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 SNRPD2P62316 118 aaKnown RBP10.51□□□□□ -0.73
LSM2-209ENST00000470083 TRA2BP62995 288 aaKnown RBP10.51□□□□□ -0.73
LSM2-209ENST00000470083 CHRNEQ04844 493 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 DLG1Q12959 904 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 GRAMD1BQ3KR37 738 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 ANKMY2Q8IV38 441 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 FAM9CQ8IZT9 166 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 ANKS4BQ8N8V4 417 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 CDK15Q96Q40 435 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 SNX18Q96RF0 628 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 NTMQ9P121 344 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 SLC12A4Q9UP95 1085 aa10.51□□□□□ -0.73
LSM2-209ENST00000470083 STAMBPO95630 424 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 GFAPP14136 432 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 ENPP1P22413 925 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 EIF1P41567 113 aaKnown RBP10.5□□□□□ -0.73
LSM2-209ENST00000470083 RFX3P48380 749 aa10.5□□□□□ -0.73
LSM2-209ENST00000470083 ALDH18A1P54886 795 aaKnown RBP10.5□□□□□ -0.73
LSM2-209ENST00000470083 SLC18A2Q05940 514 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms