RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 RAI1Q7Z5J4 1906 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-208ENST00000470076 A0A1W2PQD3 144 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 A0A1W2PRB8 838 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 FAM171A2A8MVW0 826 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 SCDO00767 359 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 ADAMDEC1O15204 470 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 SS18L1O75177 396 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-208ENST00000470076 SYNGR4O95473 234 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 BCKDHAP12694 445 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 ME2P23368 584 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 PSMA4P25789 261 aaKnown RBP15.67■□□□□ 0.1
COL7A1-208ENST00000470076 SLC6A8P48029 635 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 PRIM2P49643 509 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 LTBQ06643 244 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 MLC1Q15049 377 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 EXOC3L2Q2M3D2 409 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
COL7A1-208ENST00000470076 PLPPR5Q32ZL2 321 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 GALNTL6Q49A17 601 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 EXOSC6Q5RKV6 272 aaKnown RBP15.67■□□□□ 0.1
COL7A1-208ENST00000470076 PRSS57Q6UWY2 283 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 ESPNLQ6ZVH7 1005 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 ZAR1Q86SH2 424 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 DDIASQ8IXT1 998 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 GATSQ8NAP1 163 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 CCL19Q99731 98 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 SMR3AQ99954 134 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 MED17Q9NVC6 651 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 MKS1Q9NXB0 559 aa15.67■□□□□ 0.1
COL7A1-208ENST00000470076 TMEM114B3SHH9 223 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 CXCL13O43927 109 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 MAPK1P28482 360 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 HPCAL1P37235 193 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 RPL3P39023 403 aaKnown RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 POU6F2P78424 691 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 PDSS1Q5T2R2 415 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 ANKRD34AQ69YU3 496 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 CLEC9AQ6UXN8 241 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 C22orf34Q6ZV56 151 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 OR2V1Q8NHB1 315 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 TWIST2Q8WVJ9 160 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 JADE3Q92613 823 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 FAM120BQ96EK7 910 aaKnown RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 C16orf58Q96GQ5 468 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 SH3YL1Q96HL8 342 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 RNF145Q96MT1 663 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 HS3ST6Q96QI5 342 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 STACQ99469 402 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 BTBD2Q9BX70 525 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 ZNF395Q9H8N7 513 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 EML4Q9HC35 981 aaKnown RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 DUSP22Q9NRW4 184 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 ZCCHC3Q9NUD5 404 aaKnown RBP15.66■□□□□ 0.1
COL7A1-208ENST00000470076 FBXO34Q9NWN3 711 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 ATP6V1HQ9UI12 483 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 CLEC4AQ9UMR7 237 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 TRAF6Q9Y4K3 522 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 TLN2Q9Y4G6 2542 aa15.66■□□□□ 0.1
COL7A1-208ENST00000470076 NUP214P35658 2090 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-208ENST00000470076 PIP5K1BO14986 540 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 NPHS1O60500 1241 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 LOXP28300 417 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-208ENST00000470076 EIF1P41567 113 aaKnown RBP15.65■□□□□ 0.1
COL7A1-208ENST00000470076 UGT3A2Q3SY77 523 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 BEX5Q5H9J7 111 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 HBMQ6B0K9 141 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 GTF2IRD2BQ6EKJ0 949 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 STAC2Q6ZMT1 411 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 BEND4Q6ZU67 534 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 GTF2IRD2Q86UP8 949 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 STK32CQ86UX6 486 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 TRABD2AQ86V40 505 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 LRRN4CLQ8ND94 238 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 B4GALNT2Q8NHY0 566 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 APOPT1Q96IL0 206 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 PPP3R2Q96LZ3 170 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 NPAS1Q99742 590 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 PIGUQ9H490 435 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 SIRT3Q9NTG7 399 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-208ENST00000470076 GIN1Q9NXP7 522 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 ZANQ9Y493 2812 aa15.65■□□□□ 0.1
COL7A1-208ENST00000470076 A0A0J9YW62 118 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 TMEM233B4DJY2 109 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 TNFSF11O14788 317 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 SCAMP2O15127 329 aaKnown RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 SOX30O94993 753 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 OPN1LWP04000 364 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 HMGN2P05204 90 aaKnown RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 HEXAP06865 529 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 THBDP07204 575 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 CHRNGP07510 517 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 LINGO3P0C6S8 592 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 PABPC4LP0CB38 370 aaKnown RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 EFNA1P20827 205 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 LASP1Q14847 261 aaKnown RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 CD226Q15762 336 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 ARL13AQ5H913 290 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-208ENST00000470076 CCNJQ5T5M9 372 aa15.64■□□□□ 0.09
COL7A1-208ENST00000470076 Q71RC1 249 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms