RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 GGNQ86UU5 652 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 GRAMD2AQ8IUY3 354 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 GTPBP8Q8N3Z3 284 aaPredicted RBP12.68□□□□□ -0.38
COMMD3-208ENST00000470045 MEIOBQ8N635 442 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 METTL25Q8N6Q8 603 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 GATSQ8NAP1 163 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 OR5M1Q8NGP8 315 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 MIPOL1Q8TD10 442 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 OR7D2Q96RA2 312 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 AIG1Q9NVV5 245 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
COMMD3-208ENST00000470045 HRNRQ86YZ3 2850 aaPredicted RBP12.68□□□□□ -0.38
COMMD3-208ENST00000470045 FAM221AA4D161 298 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 H0YC42 278 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 H3BML4 177 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 HDAC3O15379 428 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CRHP06850 196 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 HPGDP15428 266 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 ATP6V1C1P21283 382 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 SOAT1P35610 550 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 AGFG1P52594 562 aaKnown RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CLNS1AP54105 237 aaKnown RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 TPD52P55327 224 aaPredicted RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 EEFSECP57772 596 aaKnown RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 EEF1A1P68104 462 aaKnown RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CASP8Q14790 479 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 FLYWCH1Q4VC44 716 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 KLHL26Q53HC5 615 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 EEF1A1P5Q5VTE0 462 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 GCNT2Q8N0V5 402 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CHDHQ8NE62 594 aaPredicted RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 OR5D16Q8NGK9 328 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 ZBTB8AQ96BR9 441 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 INTS12Q96CB8 462 aaKnown RBP12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CHMP6Q96FZ7 201 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 NPAS1Q99742 590 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 HOXD1Q9GZZ0 328 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 MED17Q9NVC6 651 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CRIM1Q9NZV1 1036 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 VDAC3Q9Y277 283 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
COMMD3-208ENST00000470045 RNF103-CHMP3A0A140T963 221 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 PRSS51A0A1B0GVH4 220 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 A0A1W2PNV4 684 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SLC22A20A6NK97 555 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SHISA8B8ZZ34 492 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 EEF1E1-BLOC1S5C9J1V9 151 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 E9PBE3 544 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 KLF11O14901 512 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 EEF1E1O43324 174 aaKnown RBP12.66□□□□□ -0.38
COMMD3-208ENST00000470045 GMFGO60234 142 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 AK1P00568 194 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 LINGO3P0C6S8 592 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 KIR2DL3P43628 341 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ATP12AP54707 1039 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 RPS26P62854 115 aaKnown RBP12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ZNF117Q03924 483 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SNTB1Q13884 538 aaKnown RBP12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SPANXN4Q5MJ08 99 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ANXA8L1Q5VT79 327 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ATG16L1Q676U5 607 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 C6orf120Q7Z4R8 191 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SPATA19Q7Z5L4 167 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 KIF18BQ86Y91 864 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ZNF527Q8NB42 609 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 OR4A15Q8NGL6 344 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 B4GALNT2Q8NHY0 566 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 MGARPQ8TDB4 240 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 FAM222BQ8WU58 562 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 FIG4Q92562 907 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 MAELQ96JY0 434 aaKnown RBP12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ADGRG7Q96K78 797 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SLC35G5Q96KT7 338 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 TEX37Q96LM6 180 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 SDF2Q99470 211 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 PINK1Q9BXM7 581 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 PIGMQ9H3S5 423 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 RNF122Q9H9V4 155 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 NKIRAS1Q9NYS0 192 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 ICAM5Q9UMF0 924 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
COMMD3-208ENST00000470045 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 DUXAA6NLW8 204 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 SLCO1B7G3V0H7 640 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 SEC14L5O43304 696 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 OIP5O43482 229 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 CTAG2O75638 210 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 MATN1P21941 496 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 UQCRC2P22695 453 aa12.65□□□□□ -0.38
COMMD3-208ENST00000470045 EPHA3P29320 983 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms