RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 FAM183AA6NL82 134 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 C12orf71A8MTZ7 269 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 FMO6PO60774 539 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 C1QBP02746 253 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 PSKH1P11801 424 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 ELK1P19419 428 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 THBS2P35442 1172 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 WASP42768 502 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 CTBP2P56545 445 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 RGS1Q08116 209 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 FAPQ12884 760 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 SGCGQ13326 291 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 MADCAM1Q13477 382 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 COL9A2Q14055 689 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-209ENST00000470026 GALEQ14376 348 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 FBXO42Q6P3S6 717 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 PLBD1Q6P4A8 553 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 PAMR1Q6UXH9 720 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-209ENST00000470026 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-209ENST00000470026 OR4K14Q8NGD5 310 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 OR5M3Q8NGP4 307 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 GRPEL2Q8TAA5 225 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 HS6ST2Q96MM7 605 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 SERINC2Q96SA4 455 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 ALG8Q9BVK2 526 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 SLC17A9Q9BYT1 436 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 IL20RAQ9UHF4 553 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 C19orf53Q9UNZ5 99 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-209ENST00000470026 SATB2Q9UPW6 733 aa12.69□□□□□ -0.38
BRCA1-209ENST00000470026 PLRG1O43660 514 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 ALX3O95076 343 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 MAKP20794 623 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 MAPK14Q16539 360 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 GARNL3Q5VVW2 1013 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 TMPRSS11FQ6ZWK6 438 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 PLCZ1Q86YW0 608 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF619Q8N2I2 560 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 TMEM99Q8N816 258 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 FANK1Q8TC84 345 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 OR2A5Q96R48 311 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 BEX2Q9BXY8 128 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 FGF22Q9HCT0 170 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CMC2Q9NRP2 79 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 NLKQ9UBE8 527 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 A0A1W2PQU0 124 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 TNFSF14O43557 240 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 PLPP2O43688 288 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 NARSO43776 548 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 ORC5O43913 435 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 SC5DO75845 299 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 DBIP07108 87 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 PAICSP22234 425 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 F8A1P23610 371 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 NDUFS1P28331 727 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 RFX3P48380 749 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CLDN2P57739 230 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 BTG1P62324 171 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 RUNX2Q13950 521 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 TRAM1Q15629 374 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 TMEM239Q8WW34 195 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 PTP4A1Q93096 173 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 TRIM63Q969Q1 353 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CREB3L1Q96BA8 519 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 FCRL4Q96PJ5 515 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CD180Q99467 661 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 HCAR1Q9BXC0 346 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 DPH1Q9BZG8 443 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 ENKD1Q9H0I2 346 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CACYBPQ9HB71 228 aaKnown RBP12.68□□□□□ -0.38
BRCA1-209ENST00000470026 C20orf141Q9NUB4 165 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 EXTL2Q9UBQ6 330 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 DAPP1Q9UN19 280 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
BRCA1-209ENST00000470026 OR6C70A6NIJ9 312 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 BTN3A3O00478 584 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PLOD3O60568 738 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 HOXC4P09017 264 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 IFI6P09912 130 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 CHRNB1P11230 501 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PRG2P13727 222 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 CPMP14384 443 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 NID1P14543 1247 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 ARSBP15848 533 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 HK1P19367 917 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SLC6A1P30531 599 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 MAP3K8P41279 467 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 AGFG1P52594 562 aaKnown RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 GALK2Q01415 458 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SUZ12Q15022 739 aaKnown RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 OR1Q1Q15612 314 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SDE2Q6IQ49 451 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms