RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 GTPBP8Q8N3Z3 284 aaPredicted RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 CEP70Q8NHQ1 597 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 ARSGQ96EG1 525 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 PIK3IP1Q96FE7 263 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 MARK4Q96L34 752 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 MED18Q9BUE0 208 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 MED17Q9NVC6 651 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 ATP6V1HQ9UI12 483 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 PROCRQ9UNN8 238 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 TMED5Q9Y3A6 229 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 SNX8Q9Y5X2 465 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 AP4B1Q9Y6B7 739 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 LINC01387J3KSC0 135 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 CASKO14936 926 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 LYPLA1O75608 230 aaPredicted RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 C6orf47O95873 294 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 NGFRP08138 427 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 CD8BP10966 210 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF17P17021 662 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 CRYGSP22914 178 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 HOXC12P31275 282 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 HPCAL1P37235 193 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 ASMTP46597 345 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 RPS3AP61247 264 aaKnown RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 EEF1A1P68104 462 aaKnown RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF117Q03924 483 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 FOXF1Q12946 379 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 C6orf136Q5SQH8 315 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 CBLN3Q6UW01 205 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 FAM214BQ7L5A3 538 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 OLIG3Q7RTU3 272 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 CLEC4FQ8N1N0 589 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 OR5AK3PQ8NH89 298 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 AENQ8WTP8 325 aaKnown RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 MTERF3Q96E29 417 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 CHMP6Q96FZ7 201 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 KLHL4Q9C0H6 718 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 SERHL2Q9H4I8 314 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF395Q9H8N7 513 aaPredicted RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 NDRG3Q9UGV2 375 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 EIF3LQ9Y262 564 aaKnown RBP12.1□□□□□ -0.47
EFNA1-203ENST00000469878 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
EFNA1-203ENST00000469878 A0A0J9YW62 118 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 SCDO00767 359 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 EFNA2O43921 213 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 GOSR1O95249 250 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 NTN1O95631 604 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 THBDP07204 575 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF41P51814 821 aaPredicted RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 RPS26P62854 115 aaKnown RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 POU6F2P78424 691 aaPredicted RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 MLC1Q15049 377 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 TOMM34Q15785 309 aaPredicted RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 IL23RQ5VWK5 629 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 CDC73Q6P1J9 531 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 OR5D16Q8NGK9 328 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 OR6Y1Q8NGX8 325 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 PPP1R36Q96LQ0 422 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 BTBD2Q9BX70 525 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 SRXN1Q9BYN0 137 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 PRRG4Q9BZD6 226 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 PIGUQ9H490 435 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 EML4Q9HC35 981 aaKnown RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 UBQLN4Q9NRR5 601 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 GPATCH2Q9NW75 528 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 ELOVL5Q9NYP7 299 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 EDARQ9UNE0 448 aa12.09□□□□□ -0.47
EFNA1-203ENST00000469878 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
EFNA1-203ENST00000469878 A0A087WZY1 265 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 CENPVL1A0A0U1RR11 272 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 C7orf72A4D263 438 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 ESPNB1AK53 854 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 C16orf97H3BN30 126 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 ITM2AO43736 263 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 TYROBPO43914 113 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 SS18L1O75177 396 aaPredicted RBP12.08□□□□□ -0.48
EFNA1-203ENST00000469878 BPGMP07738 259 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 G6PDP11413 515 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 FCGR2AP12318 317 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 SFTPDP35247 375 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 ETV4P43268 484 aa12.08□□□□□ -0.48
EFNA1-203ENST00000469878 CCT3P49368 545 aaKnown RBP12.08□□□□□ -0.48
EFNA1-203ENST00000469878 NKX6-1P78426 367 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms