RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SIAH2O43255 324 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 GMFGO60234 142 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 SLU7O95391 586 aaKnown RBP14.64□□□□□ -0.07
COL9A3-208ENST00000469802 CD79BP40259 229 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 SIRPAP78324 504 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 POU6F2P78424 691 aaPredicted RBP14.64□□□□□ -0.07
COL9A3-208ENST00000469802 CPTPQ5TA50 214 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 IL23RQ5VWK5 629 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 FBXW10Q5XX13 1052 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 CDC73Q6P1J9 531 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 KRTCAP2Q8N6L1 136 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 NATD1Q8N6N6 113 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 GATSQ8NAP1 163 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 FNDC5Q8NAU1 212 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 SFXN5Q8TD22 340 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 NUDT8Q8WV74 236 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 OR5P2Q8WZ92 322 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 JADE3Q92613 823 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 CDS1Q92903 461 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 CXorf36Q9H7Y0 433 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 NEUROD4Q9HD90 331 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 MED17Q9NVC6 651 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 ATAD3AQ9NVI7 634 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 GPATCH2Q9NW75 528 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 ASIC5Q9NY37 505 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 NDRG3Q9UGV2 375 aa14.64□□□□□ -0.07
COL9A3-208ENST00000469802 DEFB108AA8MXU0 73 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 SCDO00767 359 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 ADAMDEC1O15204 470 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 PRPS1L1P21108 318 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 UGT2B10P36537 528 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 SLC6A8P48029 635 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF844Q08AG5 666 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 POU4F3Q15319 338 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 FAM214BQ7L5A3 538 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 WDR75Q8IWA0 830 aaKnown RBP14.63□□□□□ -0.07
COL9A3-208ENST00000469802 OR56A1Q8NGH5 318 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 OR10D3Q8NH80 312 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 POC1BQ8TC44 478 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 RNF145Q96MT1 663 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 ZIM3Q96PE6 472 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 ACTRT3Q9BYD9 372 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 ELOVL5Q9NYP7 299 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 SNX8Q9Y5X2 465 aa14.63□□□□□ -0.07
COL9A3-208ENST00000469802 NPIPB9F8W1W9 429 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 EIF1AYO14602 144 aaKnown RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 CTIFO43310 598 aaKnown RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 C6orf47O95873 294 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 LINGO3P0C6S8 592 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 G6PDP11413 515 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 CD99P14209 185 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 NID1P14543 1247 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 KLK2P20151 261 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 CCT3P49368 545 aaKnown RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF41P51814 821 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 RAC1P63000 192 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF117Q03924 483 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 DEFB113Q30KQ7 82 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 LSM12Q3MHD2 195 aaKnown RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 B4GALNT2Q8NHY0 566 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 TUBGCP3Q96CW5 907 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 SH3YL1Q96HL8 342 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 PKNOX2Q96KN3 472 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 MARK4Q96L34 752 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 WFIKKN1Q96NZ8 548 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 BHLHE41Q9C0J9 482 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 DLL4Q9NR61 685 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 PAQR5Q9NXK6 330 aaPredicted RBP14.62□□□□□ -0.07
COL9A3-208ENST00000469802 KLHL28Q9NXS3 571 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 STOML1Q9UBI4 398 aa14.62□□□□□ -0.07
COL9A3-208ENST00000469802 ITM2AO43736 263 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 SS18L1O75177 396 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 KRT16P08779 473 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 DHRS4L1P0CG22 281 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 POU2F1P14859 743 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 HPGDP15428 266 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 CD53P19397 219 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 CRYGSP22914 178 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 EIF1AXP47813 144 aaKnown RBP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 HBA1P69905 142 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 ADAM8P78325 824 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 EMX2Q04743 252 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 FOXD4Q12950 439 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 TP53BP2Q13625 1128 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 KEAP1Q14145 624 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 SGCBQ16585 318 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 SMU1Q2TAY7 513 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 KLHL26Q53HC5 615 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 DCST2Q5T1A1 773 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 ESPNLQ6ZVH7 1005 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 MTERF4Q7Z6M4 381 aaKnown RBP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF610Q8N9Z0 462 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 OR6K3Q8NGY3 331 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 MOAP1Q96BY2 351 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 GMPPAQ96IJ6 420 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 SLC39A3Q9BRY0 314 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 DUSP26Q9BV47 211 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 SSU72Q9NP77 194 aaKnown RBP14.61□□□□□ -0.07
COL9A3-208ENST00000469802 ICAM5Q9UMF0 924 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms