RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 TM7SF3Q9NS93 570 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF275Q9NSD4 429 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SLCO1C1Q9NYB5 712 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 COPZ2Q9P299 210 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 EXTL2Q9UBQ6 330 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RALYQ9UKM9 306 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CLCA2Q9UQC9 943 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 NUBP2Q9Y5Y2 271 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CACNG2Q9Y698 323 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CFAP47Q6ZTR5 3102 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SHISA3A0PJX4 238 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CASC3O15234 703 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SLC16A8O95907 504 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RBMS1P29558 406 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 AFF3P51826 1226 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 DCDC1P59894 354 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SRP54P61011 504 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SNTA1Q13424 505 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 AANATQ16613 207 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF284Q2VY69 593 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 HLA-BQ31612 363 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SLC27A4Q6P1M0 643 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TMEM65Q6PI78 240 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 OAFQ86UD1 273 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 GPAT4Q86UL3 456 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 COMMD7Q86VX2 200 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 MORN4Q8NDC4 146 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TOR1AIP2Q8NFQ8 470 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 OR11H7Q8NGC8 314 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 OR4K5Q8NGD3 323 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 WDR48Q8TAF3 677 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 RFKQ969G6 155 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF578Q96N58 590 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SLC38A2Q96QD8 506 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 BTBD1Q9H0C5 482 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ABCG5Q9H222 651 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 KCNN2Q9H2S1 579 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 CLEC4MQ9H2X3 399 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 DPAGT1Q9H3H5 408 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 C6orf106Q9H6K1 298 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 ERVMER34-1Q9H9K5 563 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 IL21RQ9HBE5 538 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 PRSS16Q9NQE7 514 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TAAR2Q9P1P5 351 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 TNFRSF10DQ9UBN6 386 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SCML1Q9UN30 329 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 LHX6Q9UPM6 363 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 EXOGQ9Y2C4 368 aaKnown RBP8.95□□□□□ -0.98
HDAC3-205ENST00000469550 PLXNA2O75051 1894 aa8.95□□□□□ -0.98
HDAC3-205ENST00000469550 SLC5A10A0PJK1 596 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 SNAPC5O75971 98 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 SEMA4FO95754 770 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 IGHA1P01876 353 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 IL3P08700 152 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 OR12D1P0DN82 309 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF250P15622 560 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 NPPBP16860 134 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 CD27P26842 260 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 ACSL1P33121 698 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 BTCP35070 178 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 CLCNKAP51800 687 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 EPHA4P54764 986 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 POU6F2P78424 691 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 CNTN1Q12860 1018 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF155Q12901 538 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 MADCAM1Q13477 382 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 SLBPQ14493 270 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 FNDC3BQ53EP0 1204 aaKnown RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 BCL2L15Q5TBC7 163 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 PXDC1Q5TGL8 231 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 HBMQ6B0K9 141 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 BRAT1Q6PJG6 821 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 FAM83HQ6ZRV2 1179 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 TMPRSS7Q7RTY8 843 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 TMPRSS11BQ86T26 416 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 RBM45Q8IUH3 476 aaKnown RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 TIGD4Q8IY51 512 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 KLHL36Q8N4N3 616 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 GALNT11Q8NCW6 608 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 OR11H4Q8NGC9 324 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 NR4A3Q92570 626 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 UBE2E3Q969T4 207 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 TMEM159Q96B96 161 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 OTUB1Q96FW1 271 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 ORAI3Q9BRQ5 295 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF649Q9BS31 505 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 FNDC11Q9BVV2 318 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 SAP130Q9H0E3 1048 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 RSPH9Q9H1X1 276 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 OR51J1Q9H342 316 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 NEUROD4Q9HD90 331 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 MIEF1Q9NQG6 463 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 MAN2C1Q9NTJ4 1040 aa8.94□□□□□ -0.98
HDAC3-205ENST00000469550 NFKBIL1Q9UBC1 381 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-205ENST00000469550 SEC14L3Q9UDX4 400 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms