RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-219	ENST00000469479	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	TC2N	Q8N9U0	490 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	MFSD9	Q8NBP5	474 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	TRPV3	Q8NET8	790 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	OR5T3	Q8NGG3	340 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	NT5C	Q8TCD5	201 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	SMAP2	Q8WU79	429 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	INTS12	Q96CB8	462 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	RHBDF1	Q96CC6	855 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	IQCD	Q96DY2	449 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	C11orf24	Q96F05	449 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	PGM2	Q96G03	612 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	JSRP1	Q96MG2	331 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	APOL2	Q9BQE5	337 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	HAUS8	Q9BT25	410 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	NPL	Q9BXD5	320 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	UGT2B28	Q9BY64	529 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	ZNF556	Q9HAH1	456 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	EML4	Q9HC35	981 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	NECTIN3	Q9NQS3	549 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	TRMT1	Q9NXH9	659 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	STEAP1	Q9UHE8	339 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	ZNF223	Q9UK11	482 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	RUVBL2	Q9Y230	463 aa	Known RBP	4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	LIPT1	Q9Y234	373 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	DLGAP4	Q9Y2H0	992 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	C15orf41	Q9Y2V0	281 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	RNF115	Q9Y4L5	304 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	PCDHGB1	Q9Y5G3	927 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	SVEP1	Q4LDE5	3571 aa		4.18	□□□□□ -1.74
VPS8-219	ENST00000469479	ROS1	P08922	2347 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ARHGAP21	Q5T5U3	1957 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479		A0A096LNT2	108 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	UQCRHL	A0A096LP55	91 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	FAM234B	A2RU67	622 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	TMEM89	A2RUT3	159 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479		H7C0C1	242 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	APOC4-APOC2	K7ER74	178 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	NDUFS8	O00217	210 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	EMC8	O43402	210 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ZBTB14	O43829	449 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	NDUFS3	O75489	264 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	TNFSF13	O75888	250 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	FTCD	O95954	541 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	GOT2	P00505	430 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	APOC2	P02655	101 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	IFNA16	P05015	189 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	SERPING1	P05155	500 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	DANCR	P0C864	163 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	PRSS56	P0CW18	603 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	IGHV4-31	P0DP07	118 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	FCGR2A	P12318	317 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	PECAM1	P16284	738 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	USF1	P22415	310 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	IGFBP5	P24593	272 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	GSTM2	P28161	218 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	PTPN6	P29350	595 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	SRP14	P37108	136 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ATP5O	P48047	213 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	RFX2	P48378	723 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	CCR8	P51685	355 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	STXBP1	P61764	594 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	UBE2H	P62256	183 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	TBPL1	P62380	186 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	CCZ1B	P86790	482 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	CCZ1	P86791	482 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	MYL5	Q02045	173 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	CDH17	Q12864	832 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ZNF267	Q14586	743 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	IZUMO4	Q1ZYL8	232 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	PARP6	Q2NL67	630 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	PRAMEF20	Q5VT98	475 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	MRNIP	Q6NTE8	343 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ALKBH5	Q6P6C2	394 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	AAGAB	Q6PD74	315 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	CHMP1B	Q7LBR1	199 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	P4HA3	Q7Z4N8	544 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	GCNT2	Q8N0V5	402 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	TAGAP	Q8N103	731 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	KRT222	Q8N1A0	295 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	CNEP1R1	Q8N9A8	125 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	MCU	Q8NE86	351 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	SLC35G2	Q8TBE7	412 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ZNF418	Q8TF45	676 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	FAM216A	Q8WUB2	273 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	HES6	Q96HZ4	224 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	ZNF845	Q96IR2	970 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	FAR2	Q96K12	515 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	PKP4	Q99569	1192 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	TUBA1C	Q9BQE3	449 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	RBM4	Q9BWF3	364 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	OR8D2	Q9GZM6	311 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	P2RY12	Q9H244	342 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	UBQLN3	Q9H347	655 aa		4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	MOV10	Q9HCE1	1003 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-219	ENST00000469479	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms