RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LRRC32Q14392 662 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 Q5PR19 223 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 KIAA0930Q6ICG6 404 aaPredicted RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 LRRN1Q6UXK5 716 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 ADHFE1Q8IWW8 467 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 PUSL1Q8N0Z8 303 aaKnown RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 BEST4Q8NFU0 473 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 WNT2BQ93097 391 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 SPATA5L1Q9BVQ7 753 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 TRIM54Q9BYV2 358 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 CLEC1BQ9P126 229 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 STOX2Q9P2F5 926 aaPredicted RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 NFKBIL1Q9UBC1 381 aaPredicted RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 C9orf170A2RU37 121 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 C5orf52A6NGY3 159 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 UBE2CO00762 179 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 SLC34A2O95436 690 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 AK4P27144 223 aaPredicted RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 APEX1P27695 318 aaKnown RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 MMP12P39900 470 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 GPR3P46089 330 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 RFX3P48380 749 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 PTSQ03393 145 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 MED22Q15528 200 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 OCLNQ16625 522 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 SFRP5Q5T4F7 317 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 KDM4DQ6B0I6 523 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 POMGNT2Q8NAT1 580 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 CAMKVQ8NCB2 501 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 PIH1D2Q8WWB5 315 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 FAM3CQ92520 227 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 KAT2AQ92830 837 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 ZBED6CLQ96FA7 236 aaPredicted RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 PPP1R16AQ96I34 528 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 RDH12Q96NR8 316 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 BARD1Q99728 777 aaKnown RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 EMC7Q9NPA0 242 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 EIF2B3Q9NR50 452 aaKnown RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 GDE1Q9NZC3 331 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 LUZP4Q9P127 313 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 GPR55Q9Y2T6 319 aaPredicted RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 FREM2Q5SZK8 3169 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 PRR23D1E9PI22 279 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 SDHDO14521 159 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 VPS4BO75351 444 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 OR4F21O95013 312 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 SERPINA3P01011 423 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 C1QAP02745 245 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 PRR23D2P0DMB1 279 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 RPIAP49247 311 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 YBX1P67809 324 aaKnown RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 OR4D1Q15615 310 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 MICBQ29980 383 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ZNF805Q5CZA5 627 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ZNF551Q7Z340 670 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 TMEFF1Q8IYR6 380 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 SVBPQ8N300 66 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 BPIFCQ8NFQ6 507 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ZNF675Q8TD23 568 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 FCGR1BQ92637 280 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 RSC1A1Q92681 617 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 HLA-CQ95604 372 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 UBE2FQ969M7 185 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CDX2Q99626 313 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 HOPXQ9BPY8 73 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 SPRTNQ9H040 489 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 A0A1W2PQL4 384 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 FAM170BA6NMN3 283 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ALDOBP05062 364 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 HSD17B1P14061 328 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 PTGER1P34995 402 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 RORCP51449 518 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CACNG1Q06432 222 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ZNF549Q6P9A3 640 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 Q6ZNB5 142 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 TIFABQ6ZNK6 161 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CMIPQ8IY22 773 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 HMGCLL1Q8TB92 370 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 RFKQ969G6 155 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ARRDC3Q96B67 414 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ROPN1LQ96C74 230 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 NUS1Q96E22 293 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 TOLLIPQ9H0E2 274 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 HDHD2Q9H0R4 259 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 MIXL1Q9H2W2 232 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 UBE2ZQ9H832 354 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 LMAN1LQ9HAT1 526 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 PDFQ9HBH1 243 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 PTTG3PQ9NZH4 202 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 IL17CQ9P0M4 197 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 KCNIP3Q9Y2W7 256 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 OR10H1Q9Y4A9 318 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 A0A1B0GW55 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 HSBP1L1C9JCN9 74 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms