RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	NCOA6	Q14686	2063 aa	Predicted RBP	4.69	□□□□□ -1.66
RBM17-208	ENST00000467080	COL6A5	A8TX70	2615 aa		4.69	□□□□□ -1.66
RBM17-208	ENST00000467080	STAB1	Q9NY15	2570 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	SEC16A	O15027	2179 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	FN1	P02751	2386 aa	Known RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	IGKV3D-15	A0A087WSY6	115 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	GTPBP10	A4D1E9	387 aa	Known RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	SLCO1B7	G3V0H7	640 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	SLC33A1	O00400	549 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	E2F3	O00716	465 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	PDXK	O00764	312 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	POLR2D	O15514	142 aa	Known RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	LRRTM2	O43300	516 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CLDN11	O75508	207 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	KIAA0754	O94854	1291 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CCNB1	P14635	433 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	TIA1	P31483	386 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	GTF2H1	P32780	548 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	RPL34	P49207	117 aa	Known RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CDH4	P55283	916 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	GFER	P55789	205 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	STX1B	P61266	288 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	SNRPD1	P62314	119 aa	Known RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	LCE1E	Q5T753	118 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	ALKBH5	Q6P6C2	394 aa	Known RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	ARHGAP22	Q7Z5H3	698 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CDK20	Q8IZL9	346 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	SLC34A3	Q8N130	599 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	FBXL13	Q8NEE6	735 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	FDCSP	Q8NFU4	85 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	OR7G3	Q8NG95	312 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	OR11H4	Q8NGC9	324 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	OR56A4	Q8NGH8	313 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	SSMEM1	Q8WWF3	244 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	KRT35	Q92764	455 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	MOB3A	Q96BX8	217 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	OTUB1	Q96FW1	271 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	NSMCE3	Q96MG7	304 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CPNE1	Q99829	537 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	FN3K	Q9H479	309 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	MID1IP1	Q9NPA3	183 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	PIGV	Q9NUD9	493 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CSAG2	Q9Y5P2	127 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	PCM1	Q15154	2024 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	CSPG4	Q6UVK1	2322 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	MN1	Q10571	1320 aa	Predicted RBP	4.68	□□□□□ -1.66
RBM17-208	ENST00000467080	ANKRD12	Q6UB98	2062 aa		4.68	□□□□□ -1.66
RBM17-208	ENST00000467080		A0A0U1RQS6	177 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080		A8MX80	341 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	C19orf84	I3L1E1	186 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	PNP	P00491	289 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	GPI	P06744	558 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	SMIM18	P0DKX4	95 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	SOAT1	P35610	550 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	CASP3	P42574	277 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	GNPDA1	P46926	289 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	LEPR	P48357	1165 aa	Known RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	CLK1	P49759	484 aa	Known RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	SNU13	P55769	128 aa	Known RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	KIAA1024L	P59773	190 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	IRX1	P78414	480 aa	Predicted RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	ACTN3	Q08043	901 aa	Predicted RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	C17orf67	Q0P5P2	114 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	RCN2	Q14257	317 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	FAM174B	Q3ZCQ3	159 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	TMEM52B	Q4KMG9	183 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	LCE1F	Q5T754	118 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	PHLDB2	Q86SQ0	1253 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	SLC47A2	Q86VL8	602 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	EID3	Q8N140	333 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	OR2T6	Q8NHC8	308 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	GOLGA5	Q8TBA6	731 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	RAB7B	Q96AH8	199 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	PDLIM5	Q96HC4	596 aa	Known RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	HSFY1	Q96LI6	401 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	ATP6V0B	Q99437	205 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	ACAT2	Q9BWD1	397 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	ULBP3	Q9BZM4	244 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	ACTL8	Q9H568	366 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	POPDC2	Q9HBU9	364 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	FGF21	Q9NSA1	209 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	PLCXD1	Q9NUJ7	323 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	CNIH4	Q9P003	139 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	VPS18	Q9P253	973 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	LHX3	Q9UBR4	397 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	NEU3	Q9UQ49	428 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	SMC3	Q9UQE7	1217 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	TRAF3IP3	Q9Y228	551 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	PADI2	Q9Y2J8	665 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	ATR	Q13535	2644 aa		4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	FBN1	P35555	2871 aa	Known RBP	4.67	□□□□□ -1.66
RBM17-208	ENST00000467080	IGLV3-10	A0A075B6K4	115 aa		4.66	□□□□□ -1.66
RBM17-208	ENST00000467080	PVALEF	A0A1B0GWK0	134 aa		4.66	□□□□□ -1.66
RBM17-208	ENST00000467080	KLF11	O14901	512 aa		4.66	□□□□□ -1.66
RBM17-208	ENST00000467080	POLR1C	O15160	346 aa	Predicted RBP	4.66	□□□□□ -1.66

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