RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ADSLP30566 484 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-206ENST00000466591 LCN1P31025 176 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 SERPINB5P36952 375 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 KIR2DL2P43627 348 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-206ENST00000466591 ADAM8P78325 824 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 PDE7AQ13946 482 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 HBMQ6B0K9 141 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 BHLHB9Q6PI77 547 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 APOOLQ6UXV4 268 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 ZNF550Q7Z398 422 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 TRABD2AQ86V40 505 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 NATD1Q8N6N6 113 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 TMCO5AQ8N6Q1 288 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 OR7A2PQ8NGA2 310 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 OR10D3Q8NH80 312 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 TCP10LQ8TDR4 215 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 CDS1Q92903 461 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 FAM120BQ96EK7 910 aaKnown RBP15.75■□□□□ 0.11
COL7A1-206ENST00000466591 STACQ99469 402 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 HOXD1Q9GZZ0 328 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 TIGARQ9NQ88 270 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 MED17Q9NVC6 651 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 GIN1Q9NXP7 522 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 SLC17A7Q9P2U7 560 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 GJE1A6NN92 205 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 CTIFO43310 598 aaKnown RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 CXCL13O43927 109 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 PABPC4LP0CB38 370 aaKnown RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 FPR1P21462 350 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 SFTPDP35247 375 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 CCT3P49368 545 aaKnown RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 NKX6-1P78426 367 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 OCRLQ01968 901 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 MAD2L1Q13257 205 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ANKRD34AQ69YU3 496 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ALKBH2Q6NS38 261 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ZNF474Q6S9Z5 364 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ESPNLQ6ZVH7 1005 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 GTPBP8Q8N3Z3 284 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 OR6K3Q8NGY3 331 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 OR2V1Q8NHB1 315 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ACTRT2Q8TDY3 377 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 OR5P2Q8WZ92 322 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 PIGTQ969N2 578 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 GMPPAQ96IJ6 420 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 CCL19Q99731 98 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ACTRT3Q9BYD9 372 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ROPN1BQ9BZX4 212 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ROPN1Q9HAT0 212 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-206ENST00000466591 GIMAP2Q9UG22 337 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 ATP6V1HQ9UI12 483 aa15.74■□□□□ 0.11
COL7A1-206ENST00000466591 MPDZO75970 2070 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 AQP8O94778 261 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 SOX30O94993 753 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 NUDT17P0C025 328 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 PRPS1L1P21108 318 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 EIF1P41567 113 aaKnown RBP15.73■□□□□ 0.11
COL7A1-206ENST00000466591 FRKP42685 505 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-206ENST00000466591 CCR4P51679 360 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 RAC1P63000 192 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 PTGR1Q14914 329 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 MLC1Q15049 377 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 PGS1Q32NB8 556 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 PLPPR5Q32ZL2 321 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 IL23RQ5VWK5 629 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 GGNQ86UU5 652 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 NUDCD3Q8IVD9 361 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 LILRA2Q8N149 483 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 ATP6V1C2Q8NEY4 427 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 RFWD2Q8NHY2 731 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 ARL8AQ96BM9 186 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 MOAP1Q96BY2 351 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 GIMAP5Q96F15 307 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 PIGUQ9H490 435 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 C12orf49Q9H741 205 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 ZNF395Q9H8N7 513 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-206ENST00000466591 L2HGDHQ9H9P8 463 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 DUSP22Q9NRW4 184 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 GLRX2Q9NS18 164 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 NTMQ9P121 344 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 MED12LQ86YW9 2145 aa15.73■□□□□ 0.11
COL7A1-206ENST00000466591 A0A1W2PQD3 144 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 C6orf47O95873 294 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 LAMP1P11279 417 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 FOSL1P15407 271 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 CRYGSP22914 178 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 RNF144AP50876 292 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-206ENST00000466591 CARD18P57730 90 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 TMEM201Q5SNT2 666 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 DCST2Q5T1A1 773 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 SHEQ5VZ18 495 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 CDC73Q6P1J9 531 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 MTERF4Q7Z6M4 381 aaKnown RBP15.72■□□□□ 0.11
COL7A1-206ENST00000466591 WFDC11Q8NEX6 87 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 KLHL15Q96M94 604 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 CENPHQ9H3R5 247 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 LGALS13Q9UHV8 139 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 PCDHGB4Q9UN71 923 aa15.72■□□□□ 0.11
COL7A1-206ENST00000466591 AKAP6Q13023 2319 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms