RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ITGA2P17301 1181 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 NTSP30990 170 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 GABRA3P34903 492 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 RPS3AP61247 264 aaKnown RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 FAPQ12884 760 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 ZNHIT3Q15649 155 aaPredicted RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 SGCBQ16585 318 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 EXOC3L2Q2M3D2 409 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 TMEM44Q2T9K0 475 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 GRAMD1BQ3KR37 738 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 PPP4R4Q6NUP7 873 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 APOOLQ6UXV4 268 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 FAM214BQ7L5A3 538 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 METTL25Q8N6Q8 603 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 CCNYL1Q8N7R7 359 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 GFM2Q969S9 779 aaKnown RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 FBXW5Q969U6 566 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 ELP4Q96EB1 424 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 AMDHD1Q96NU7 426 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 LMF2Q9BU23 707 aaKnown RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 TBL1XR1Q9BZK7 514 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 BARX1Q9HBU1 254 aaPredicted RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 MYNNQ9NPC7 610 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 PLSCR4Q9NRQ2 329 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 POLR3HQ9Y535 204 aaPredicted RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 NUP214P35658 2090 aaPredicted RBP8.69□□□□□ -1.02
USP39-212ENST00000465514 PLCE1Q9P212 2302 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 IGLV3-32A0A0A0MS00 114 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 SLC35F4A4IF30 521 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 ANGPTL1O95841 491 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 IGKV1D-16P01601 117 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 GSTA1P08263 222 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 ABHD2P08910 425 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 FCGR2AP12318 317 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 HNF1AP20823 631 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 SLC6A8P48029 635 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 PSMD4P55036 377 aaKnown RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 PRR5P85299 388 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 LOXL1Q08397 574 aaPredicted RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 C17orf67Q0P5P2 114 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 SQLEQ14534 574 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 IMPG1Q17R60 797 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP39-212ENST00000465514 GLE1Q53GS7 698 aaKnown RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 NOXRED1Q6NXP6 359 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 ZNF551Q7Z340 670 aaPredicted RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 TRIM46Q7Z4K8 759 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 GGNQ86UU5 652 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 EXOC3L1Q86VI1 746 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 DEPDC4Q8N2C3 294 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 LILRB1Q8NHL6 650 aaPredicted RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 FAM76AQ8TAV0 307 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 RAB3IL1Q8TBN0 382 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 GPR151Q8TDV0 419 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 ACMSDQ8TDX5 336 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 PIK3R3Q92569 461 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 C16orf45Q96MC5 204 aaPredicted RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 PRRG4Q9BZD6 226 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 C3orf14Q9HBI5 128 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 EQTNQ9NQ60 294 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 EMCNQ9ULC0 261 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 CLEC4AQ9UMR7 237 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 VDAC3Q9Y277 283 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 WBP11Q9Y2W2 641 aaKnown RBP8.68□□□□□ -1.02
USP39-212ENST00000465514 ZNF281Q9Y2X9 895 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 EMC9Q9Y3B6 208 aa8.68□□□□□ -1.02
USP39-212ENST00000465514 UQCRHLA0A096LP55 91 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 A0A1W2PP18 115 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 TTC36A6NLP5 189 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 G3V2L1 256 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 SEC22BO75396 215 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 CRCPO75575 148 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 KCNH1O95259 989 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 PLGP00747 810 aaPredicted RBP8.67□□□□□ -1.02
USP39-212ENST00000465514 OPN1LWP04000 364 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 MYL2P10916 166 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 PRPS2P11908 318 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 CTBP2P56545 445 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 HSPB3Q12988 150 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 STAC2Q6ZMT1 411 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 IKBIPQ70UQ0 350 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 TRMT10CQ7L0Y3 403 aaKnown RBP8.67□□□□□ -1.02
USP39-212ENST00000465514 GALNT10Q86SR1 603 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 WFDC8Q8IUA0 241 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 WDR75Q8IWA0 830 aaKnown RBP8.67□□□□□ -1.02
USP39-212ENST00000465514 RFLNBQ8N5W9 214 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 C3orf56Q8N813 242 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 MNS1Q8NEH6 495 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 OR10H5Q8NGA6 315 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 OR10D3Q8NH80 312 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 SMAP2Q8WU79 429 aaPredicted RBP8.67□□□□□ -1.02
USP39-212ENST00000465514 SLC9A6Q92581 669 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 NEUROG1Q92886 237 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 GMPPAQ96IJ6 420 aaPredicted RBP8.67□□□□□ -1.02
USP39-212ENST00000465514 EGLN2Q96KS0 407 aa8.67□□□□□ -1.02
USP39-212ENST00000465514 NPAS1Q99742 590 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms