RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 COL21A1Q96P44 957 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 IP6K3Q96PC2 410 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 STACQ99469 402 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 PINK1Q9BXM7 581 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 TOR3AQ9H497 397 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 EVA1AQ9H8M9 152 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 NDUFA13Q9P0J0 144 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 PDP1Q9P0J1 537 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-215ENST00000465457 CDC14AQ9UNH5 594 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 DSPPQ9NZW4 1301 aa12.76□□□□□ -0.37
HDAC6-215ENST00000465457 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 A0A0A6YYC8 382 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 TTC36A6NLP5 189 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 I3L1I5 382 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SGK494L7N484 410 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SOCS6O14544 535 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SLC16A6O15403 523 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 OR10H2O60403 315 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 CTNSO60931 367 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 GUSBP08236 651 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 NT5EP21589 574 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SSTR2P30874 369 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 GALNSP34059 522 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 HMGA2P52926 109 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 IST1P53990 364 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 HSD17B7P56937 341 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 TUBA4AP68366 448 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SPIBQ01892 262 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SERTAD2Q14140 314 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 LTB4RQ15722 352 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 MAPK11Q15759 364 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SYPL1Q16563 259 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 GPAT3Q53EU6 434 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 KDM4DQ6B0I6 523 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 HEPHL1Q6MZM0 1159 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 MRPL14Q6P1L8 145 aaKnown RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 GFRALQ6UXV0 394 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SLC44A2Q8IWA5 706 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 C8orf59Q8N0T1 100 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 LINC00471Q8N535 108 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 ATG16L2Q8NAA4 619 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 PIK3C3Q8NEB9 887 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 OR7G2Q8NG99 324 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 OR5T3Q8NGG3 340 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 OR5D16Q8NGK9 328 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 GIPC3Q8TF64 312 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 KAT2AQ92830 837 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 GIMAP5Q96F15 307 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SPRTNQ9H040 489 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 PIGUQ9H490 435 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SMURF2Q9HAU4 748 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 POLE3Q9NRF9 147 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 DUSP22Q9NRW4 184 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SLC22A11Q9NSA0 550 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 KRT84Q9NSB2 600 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 FAM118AQ9NWS6 357 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 TUBA8Q9NY65 449 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SLC13A4Q9UKG4 626 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 HSPE1-MOB4S4R3N1 261 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 U3KQV3 271 aa12.75□□□□□ -0.37
HDAC6-215ENST00000465457 FLNAP21333 2647 aaKnown RBP12.74□□□□□ -0.37
HDAC6-215ENST00000465457 H3BNH8 94 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 FOXS1O43638 330 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 OR2B3O76000 313 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 OXSR1O95747 527 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-215ENST00000465457 CLPTM1O96005 669 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 ALOX5P09917 674 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 MST1P26927 711 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 CA7P43166 264 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 TLE4Q04727 773 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 STX4Q12846 297 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 MAP4K2Q12851 820 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 KEAP1Q14145 624 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 RPS26P11Q5JNZ5 115 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-215ENST00000465457 EXOSC6Q5RKV6 272 aaKnown RBP12.74□□□□□ -0.37
HDAC6-215ENST00000465457 AGAP7PQ5VUJ5 663 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 THAP5Q7Z6K1 395 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 TMEM179BQ7Z7N9 219 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 GPR135Q8IZ08 494 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 VWA5B2Q8N398 1253 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 OR4C15Q8NGM1 316 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 PHF10Q8WUB8 498 aaKnown RBP12.74□□□□□ -0.37
HDAC6-215ENST00000465457 AGAP4Q96P64 663 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 OR1F2PQ96R84 312 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 MBOAT4Q96T53 435 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 EQTNQ9NQ60 294 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 NDOR1Q9UHB4 597 aa12.74□□□□□ -0.37
HDAC6-215ENST00000465457 GPN3Q9UHW5 284 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-215ENST00000465457 TMEFF2Q9UIK5 374 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms