RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 SYT11Q9BT88 431 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 POLR1EQ9GZS1 481 aaKnown RBP4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 GANQ9H2C0 597 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 SNX25Q9H3E2 840 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 DPEP3Q9H4B8 488 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 SP140LQ9H930 580 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 POLD4Q9HCU8 107 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 Q9N2K0 584 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 PALMDQ9NP74 551 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 LZTFL1Q9NQ48 299 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 HPS4Q9NQG7 708 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 AGPAT5Q9NUQ2 364 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 NUDT15Q9NV35 164 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 ERAP1Q9NZ08 941 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 NUP50Q9UKX7 468 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 L3MBTL1Q9Y468 752 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 CSNK1G3Q9Y6M4 447 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 AP1M2Q9Y6Q5 423 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 RYR2Q92736 4967 aa4.48□□□□□ -1.69
CACNA1C-223ENST00000465278 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 VWFP04275 2813 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 SH3PXD2BA1X283 911 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CTAGE15A4D2H0 777 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 FAM172BPA6NC97 362 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ARGFXA6NJG6 315 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 A8MXE2 369 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GPR89AB7ZAQ6 455 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 POLR1CO15160 346 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 PFDN6O15212 129 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CLIC2O15247 247 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC16A4O15374 487 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 BUB1O43683 1085 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ATP5HO75947 161 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 PDE5AO76074 875 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 WDPCPO95876 746 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CLPTM1O96005 669 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GPR89BP0CG08 455 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 FGF5P12034 268 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CYP3A5P20815 502 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ACHEP22303 614 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CDC25CP30307 473 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 HLA-FP30511 346 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GSSP48637 474 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 POU3F4P49335 361 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 RAB28P51157 221 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GNG2P59768 71 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 POLR2LP62875 67 aaKnown RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 KCNJ10P78508 379 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 BFSP1Q12934 665 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 SRSF6Q13247 344 aaKnown RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ILKQ13418 452 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 PTPRCAPQ14761 206 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 PARP6Q2NL67 630 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 C14orf28Q4W4Y0 310 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ANKRD20A8PQ5CZ79 823 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CST9LP1Q5W188 147 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 KRT39Q6A163 491 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 RAB12Q6IQ22 244 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 MFSD12Q6NUT3 480 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 MEX3BQ6ZN04 569 aaKnown RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 RBPMS2Q6ZRY4 209 aaKnown RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 RGS9BPQ6ZS82 235 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 NUP54Q7Z3B4 507 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 NET1Q7Z628 596 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CTAGE6Q86UF2 777 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CUZD1Q86UP6 607 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 PYROXD2Q8N2H3 581 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 DEFB119Q8N690 84 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 STPG4Q8N801 248 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CLHC1Q8NHS4 586 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 LHFPL5Q8TAF8 219 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 SSMEM1Q8WWF3 244 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 HSD17B8Q92506 261 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 TMEM143Q96AN5 459 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 EEF2KMTQ96G04 330 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GBP5Q96PP8 586 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 RANBP9Q96S59 729 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC29A1Q99808 456 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CBWD1Q9BRT8 395 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 NAA11Q9BSU3 229 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 TRIM62Q9BVG3 475 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 NUP85Q9BW27 656 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 SPATA16Q9BXB7 569 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 PINK1Q9BXM7 581 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CALN1Q9BXU9 219 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GON7Q9BXV9 100 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ACPTQ9BZG2 426 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 POLR3FQ9H1D9 316 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 C10orf88Q9H8K7 445 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 LIN28AQ9H9Z2 209 aaKnown RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ZNF71Q9NQZ8 489 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 STMN3Q9NZ72 180 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 HACD3Q9P035 362 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ARMCX3Q9UH62 379 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 DNAJC12Q9UKB3 198 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 GAB2Q9UQC2 676 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ERGIC3Q9Y282 383 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms