RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PDZK1Q5T2W1 519 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 VASNQ6EMK4 673 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 FRRS1Q6ZNA5 592 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 LRRC74BQ6ZQY2 392 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 RETREG3Q86VR2 466 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF619Q8N2I2 560 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 OR5M9Q8NGP3 310 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 B4GALNT2Q8NHY0 566 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 OIT3Q8WWZ8 545 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 ZG16BQ96DA0 208 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 C1GALT1C1Q96EU7 318 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 PNPLA3Q9NST1 481 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 GMEB1Q9Y692 573 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 CAPN7Q9Y6W3 813 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 BAHCC1Q9P281 2608 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 LOC100653049A0A140TA62 436 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 SERINC4A6NH21 518 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 EVPLLA8MZ36 301 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 FBP2O00757 339 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 HCRTR2O43614 444 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 KRT34O76011 436 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 ACTL6AO96019 429 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 CHRM4P08173 479 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 BMP7P18075 431 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 HK1P19367 917 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 CRYZQ08257 329 aaKnown RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 NFYCQ13952 458 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 MAPK11Q15759 364 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 MAPK14Q16539 360 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 RUNDC3AQ59EK9 446 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 EMC4Q5J8M3 183 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF585AQ6P3V2 769 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 AAGABQ6PD74 315 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 DHDDSQ86SQ9 333 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 MTDHQ86UE4 582 aaKnown RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 EID3Q8N140 333 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 SH3YL1Q96HL8 342 aaPredicted RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 TIMP4Q99727 224 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 UGT2B28Q9BY64 529 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 SLC38A1Q9H2H9 487 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 TP63Q9H3D4 680 aaPredicted RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 CALML5Q9NZT1 146 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 CORO2BQ9UQ03 480 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 CARD8Q9Y2G2 431 aa13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 RPH3AQ9Y2J0 694 aaPredicted RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 DIDO1Q9BTC0 2240 aaKnown RBP13.17□□□□□ -0.3
SQSTM1-205ENST00000464493 LRRK2Q5S007 2527 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF264O43296 627 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 TNFRSF21O75509 655 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 NUDT7P0C024 238 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 BMP2P12643 396 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 GPX2P18283 190 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 TCEA1P23193 301 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 CHMP24386 653 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 ADH7P40394 386 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 GFRA1P56159 465 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 PER3P56645 1201 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF117Q03924 483 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 CYLC2Q14093 348 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 GNA13Q14344 377 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 GLYR1Q49A26 553 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 COQ5Q5HYK3 327 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 CBLN3Q6UW01 205 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 EIF3MQ7L2H7 374 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 SNX32Q86XE0 403 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 PMM1Q92871 262 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 SFXN2Q96NB2 322 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 CGREF1Q99674 301 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 QRSL1Q9H0R6 528 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 IKZF5Q9H5V7 419 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 A4GALTQ9NPC4 353 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 ALKBH4Q9NXW9 302 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 MEMO1Q9Y316 297 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
SQSTM1-205ENST00000464493 MED12Q93074 2177 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 A0A087WZY1 265 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 WIPF3A6NGB9 483 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 AGAP5A6NIR3 686 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 FIGNL2A6NMB9 653 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 BBIP1A8MTZ0 92 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 FAM47E-STBD1D6RA91 191 aa13.15□□□□□ -0.3
SQSTM1-205ENST00000464493 E9PLN8 166 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms