RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GALNT17Q6IS24 598 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 PAMR1Q6UXH9 720 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 ZDHHC21Q8IVQ6 265 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 ZBED8Q8IZ13 594 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 CADM2Q8N3J6 435 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 GMCL1P1Q8NEA9 526 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 OR9A4Q8NGU2 314 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 OR2T34Q8NGX1 318 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 PNPT1Q8TCS8 783 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 GTSF1Q8WW33 167 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 SPRYD4Q8WW59 207 aaPredicted RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 TRUB1Q8WWH5 349 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 DPH7Q9BTV6 452 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 TSSK1BQ9BXA7 367 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 MIEF1Q9NQG6 463 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 PNO1Q9NRX1 252 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 SAMD4AQ9UPU9 718 aaKnown RBP3.08□□□□□ -1.92
CLK1-208ENST00000464454 GSTK1Q9Y2Q3 226 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 OR10H1Q9Y4A9 318 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 KIF16BQ96L93 1317 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 ABCA7Q8IZY2 2146 aa3.08□□□□□ -1.92
CLK1-208ENST00000464454 KLLNB2CW77 178 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 CPLX1O14810 134 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 OR1F1O43749 312 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 CD55P08174 381 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 FASP25445 335 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 PSMA5P28066 241 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 PRKAR2BP31323 418 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 IL2RGP31785 369 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 CHI3L1P36222 383 aaPredicted RBP3.07□□□□□ -1.92
CLK1-208ENST00000464454 BDKRB1P46663 353 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 RPL32P62910 135 aaKnown RBP3.07□□□□□ -1.92
CLK1-208ENST00000464454 CNTN2Q02246 1040 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 CSTF1Q05048 431 aaKnown RBP3.07□□□□□ -1.92
CLK1-208ENST00000464454 PJVKQ0ZLH3 352 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 TMEM52BQ4KMG9 183 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 CES3Q6UWW8 571 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 APTXQ7Z2E3 356 aaKnown RBP3.07□□□□□ -1.92
CLK1-208ENST00000464454 SERPINA9Q86WD7 417 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 M1APQ8TC57 530 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 RAET1EQ8TD07 263 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 AENQ8WTP8 325 aaKnown RBP3.07□□□□□ -1.92
CLK1-208ENST00000464454 SERAC1Q96JX3 654 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 PAXXQ9BUH6 204 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 DUSP16Q9BY84 665 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 AATFQ9NY61 560 aaKnown RBP eCLIP3.07□□□□□ -1.92
CLK1-208ENST00000464454 CHRNA9Q9UGM1 479 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 SNX6Q9UNH7 406 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 VSIG4Q9Y279 399 aa3.07□□□□□ -1.92
CLK1-208ENST00000464454 FRG2CA6NGY1 282 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 BCAS1O75363 584 aaPredicted RBP3.06□□□□□ -1.92
CLK1-208ENST00000464454 SCRG1O75711 98 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 CABYRO75952 493 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 ADCY5O95622 1261 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 NT5EP21589 574 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 HNRNPA2B1P22626 353 aaKnown RBP3.06□□□□□ -1.92
CLK1-208ENST00000464454 OTX2P32243 289 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 MEOX2P50222 304 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 PLA2G16P53816 162 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 RIPPLY1Q0D2K3 151 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 SELPLGQ14242 412 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 PDK4Q16654 411 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 NDUFA9Q16795 377 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 ZNF658Q5TYW1 1059 aaPredicted RBP3.06□□□□□ -1.92
CLK1-208ENST00000464454 METTL11BQ5VVY1 283 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 PVRIGQ6DKI7 326 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 UFSP1Q6NVU6 142 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 GPR137CQ8N3F9 429 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 CD177Q8N6Q3 437 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 ARL6IP6Q8N6S5 226 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 C15orf54Q8N8G6 183 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 OR2T33Q8NG76 320 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 MRAPQ8TCY5 172 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 OSTF1Q92882 214 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 OR5B2Q96R09 309 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 ALG12Q9BV10 488 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 ANKRD30BQ9BXX2 1392 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 RAB33BQ9H082 229 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 TMEM117Q9H0C3 514 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 RMND5AQ9H871 391 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 TNFRSF19Q9NS68 423 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 AIPL1Q9NZN9 384 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 WDR45Q9Y484 360 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 OARD1Q9Y530 152 aa3.06□□□□□ -1.92
CLK1-208ENST00000464454 DDX49Q9Y6V7 483 aaKnown RBP3.06□□□□□ -1.92
CLK1-208ENST00000464454 IGLV8-61A0A075B6I0 122 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 A0A1W2PNV4 684 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 XPO1O14980 1071 aaKnown RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 ZSCAN12O43309 604 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 LATO43561 262 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 EFNA2O43921 213 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 NEBLO76041 1014 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 TM7SF2O76062 418 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 KIAA0754O94854 1291 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 DNAH10OSP0CZ25 163 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 RPA2P15927 270 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 PGCP20142 388 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 TPSB2P20231 275 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms