RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CLDN16Q9Y5I7 305 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 EP300Q09472 2414 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-205ENST00000464187 SEC16AO15027 2179 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 CUL9Q8IWT3 2517 aa13.46□□□□□ -0.25
COL5A1-205ENST00000464187 ANKRD33BA6NCL7 494 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 OR10H2O60403 315 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 RFPL3O75679 317 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 FGF5P12034 268 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 CCL4P13236 92 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 TNNI3P19429 210 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 CCKBRP32239 447 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 SERPINB10P48595 397 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 TAS2R41P59536 307 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 IGLV3-21P80748 117 aaPredicted RBP13.46□□□□□ -0.26
COL5A1-205ENST00000464187 COX10Q12887 443 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF846Q147U1 533 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 VWA2Q5GFL6 755 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 PLAG1Q6DJT9 500 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 LINC00299Q6ZSB3 139 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 MED25Q71SY5 747 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 OR2L13Q8N349 312 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 DIO2Q92813 273 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 RBM18Q96H35 190 aaKnown RBP13.46□□□□□ -0.26
COL5A1-205ENST00000464187 SLIRPQ9GZT3 109 aaKnown RBP13.46□□□□□ -0.26
COL5A1-205ENST00000464187 ZBTB20Q9HC78 741 aaPredicted RBP13.46□□□□□ -0.26
COL5A1-205ENST00000464187 LANCL2Q9NS86 450 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 PTGFRNQ9P2B2 879 aa13.46□□□□□ -0.26
COL5A1-205ENST00000464187 CLDN25C9JDP6 229 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 FCMRO60667 390 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 CNOT3O75175 753 aaKnown RBP13.45□□□□□ -0.26
COL5A1-205ENST00000464187 CT62P0C5K7 136 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 ACP2P11117 423 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 PRKAR1BP31321 381 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 UGT2B10P36537 528 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 CLK1P49759 484 aaKnown RBP13.45□□□□□ -0.26
COL5A1-205ENST00000464187 E2F1Q01094 437 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 INSM1Q01101 510 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-205ENST00000464187 DOC2BQ14184 412 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 MINDY4Q4G0A6 757 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 ENTPD8Q5MY95 495 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 FHL5Q5TD97 284 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 DGAT2L6Q6ZPD8 337 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 BTLAQ7Z6A9 289 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 KIF18BQ86Y91 864 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 TMCO5AQ8N6Q1 288 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 TCEANCQ8N8B7 351 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 OR52P1PQ8NH57 321 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 OR5M11Q96RB7 305 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 CMKLR1Q99788 373 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 DCSTAMPQ9H295 470 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 MAT2BQ9NZL9 334 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 PCDHGA3Q9Y5H0 932 aa13.45□□□□□ -0.26
COL5A1-205ENST00000464187 A0A087WUU8 490 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 DUXAA6NLW8 204 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 CPSF4LA6NMK7 179 aaKnown RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 PRKYO43930 277 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 PLOD3O60568 738 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MC2RQ01718 297 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MGAT2Q10469 447 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 DUSP5Q16690 384 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MFSD4BQ5TF39 518 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 COX15Q7KZN9 410 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 BCDIN3DQ7Z5W3 292 aaKnown RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MEX3DQ86XN8 651 aaKnown RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 CLIP4Q8N3C7 705 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 WDR36Q8NI36 951 aaKnown RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 NR4A3Q92570 626 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 SLC9A6Q92581 669 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 CTHRC1Q96CG8 243 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 Q96MT0 163 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 PTCHD1Q96NR3 888 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 WDR12Q9GZL7 423 aaKnown RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 ARMC7Q9H6L4 198 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 SLC22A11Q9NSA0 550 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 TOR4AQ9NXH8 423 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 GALNT8Q9NY28 637 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 C19orf53Q9UNZ5 99 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF443Q9Y2A4 671 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-205ENST00000464187 B3GNT3Q9Y2A9 372 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 IFT52Q9Y366 437 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
COL5A1-205ENST00000464187 A0A087WV62 115 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CYP7B1O75881 506 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 NTN1O95631 604 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 AGR2O95994 175 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 HBQ1P09105 142 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 TRHRP34981 398 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-205ENST00000464187 RGS6P49758 472 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 LIMK1P53667 647 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 CLDN6P56747 220 aa13.43□□□□□ -0.26
COL5A1-205ENST00000464187 ZNF91Q05481 1191 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms