RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 B4DXG7 233 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 SCDO00767 359 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 TP53I11O14683 189 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 OIP5O43482 229 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 TPST2O60704 377 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 NEURL1O76050 574 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 WDPCPO95876 746 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 CCL3P10147 92 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 TNFRSF1BP20333 461 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 EVI2BP34910 448 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF136P52737 540 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 TMPRSS3P57727 454 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 SNTA1Q13424 505 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 IFI44LQ53G44 452 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 RTL4Q6ZR62 310 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 PIWIL3Q7Z3Z3 882 aaKnown RBP13.13□□□□□ -0.31
COL6A1-202ENST00000463060 MARCH3Q86UD3 253 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 LACC1Q8IV20 430 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 OR5M3Q8NGP4 307 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 SLC35B4Q969S0 331 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 ANGPTL4Q9BY76 406 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 EVA1AQ9H8M9 152 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 IL1RAPQ9NPH3 570 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 HPF1Q9NWY4 346 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 DNAJB12Q9NXW2 375 aaKnown RBP13.13□□□□□ -0.31
COL6A1-202ENST00000463060 CNIH4Q9P003 139 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 SH3GLB1Q9Y371 365 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-202ENST00000463060 NINQ8N4C6 2090 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 MGRN1O60291 552 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 ADAM11O75078 769 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SEMA7AO75326 666 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 ANGPTL1O95841 491 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 HOXB6P17509 224 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 OR1E2P47887 323 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 CYB561P49447 251 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 VLDLRP98155 873 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SKP2Q13309 424 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 RAPSNQ13702 412 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 NPTX1Q15818 432 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 TBR1Q16650 682 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 FAM98BQ52LJ0 330 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SLC22A10Q63ZE4 541 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 BICRALQ6AI39 1079 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 ZFP1Q6P2D0 407 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 AAGABQ6PD74 315 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 RBM45Q8IUH3 476 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 CYP4Z2PQ8N1L4 340 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 MDS2Q8NDY4 140 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 PHF10Q8WUB8 498 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 PYDC1Q8WXC3 89 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 PROX1Q92786 737 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SLC47A1Q96FL8 570 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SIGLEC12Q96PQ1 595 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SEPHS2Q99611 448 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 TBL1XR1Q9BZK7 514 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 AMBRA1Q9C0C7 1298 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 PLA2G3Q9NZ20 509 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 ABI3Q9P2A4 366 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 SLC35A3Q9Y2D2 325 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 PCDHGA9Q9Y5G4 932 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 V9GYQ6 96 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 EML6Q6ZMW3 1958 aa13.12□□□□□ -0.31
COL6A1-202ENST00000463060 TPRP12270 2363 aaKnown RBP13.12□□□□□ -0.31
COL6A1-202ENST00000463060 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 ACACBO00763 2458 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 IGLV3-32A0A0A0MS00 114 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 OR5H15A6NDH6 313 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 C17orf51A8MQB3 221 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 NDUFB5O43674 189 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 EIF4E2O60573 245 aaKnown RBP13.11□□□□□ -0.31
COL6A1-202ENST00000463060 FKBP6O75344 327 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 CSTAP01040 98 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 RAP2AP10114 183 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 PRG2P13727 222 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 HPGDP15428 266 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 ENDOUP21128 410 aaKnown RBP13.11□□□□□ -0.31
COL6A1-202ENST00000463060 PSMA4P25789 261 aaKnown RBP13.11□□□□□ -0.31
COL6A1-202ENST00000463060 RNF144AP50876 292 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-202ENST00000463060 KCNC4Q03721 635 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 CHRNB3Q05901 458 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 RIPK1Q13546 671 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 SLC30A6Q6NXT4 461 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 CBLN3Q6UW01 205 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 IGFL3Q6UXB1 125 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 FKBP9P1Q75LS8 142 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 TSPYL5Q86VY4 417 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-202ENST00000463060 CARM1Q86X55 608 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 DUSP19Q8WTR2 217 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 RSRC1Q96IZ7 334 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms