RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 ING1Q9UK53 422 aaPredicted RBP9.94□□□□□ -0.82
PTPN7-204ENST00000462815 NFU1Q9UMS0 254 aa9.94□□□□□ -0.82
PTPN7-204ENST00000462815 LAMP3Q9UQV4 416 aa9.94□□□□□ -0.82
PTPN7-204ENST00000462815 WBP11Q9Y2W2 641 aaKnown RBP9.94□□□□□ -0.82
PTPN7-204ENST00000462815 MAGED1Q9Y5V3 778 aaPredicted RBP9.94□□□□□ -0.82
PTPN7-204ENST00000462815 A0A087WUV0 522 aaPredicted RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 TTC36A6NLP5 189 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 TBX19O60806 448 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 RSL1D1O76021 490 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 KCNK2O95069 426 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 NTN1O95631 604 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 CD8AP01732 235 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 ABHD2P08910 425 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 NTSP30990 170 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 RFX3P48380 749 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 CLK3P49761 638 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 PSMD4P55036 377 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 CTBP2P56545 445 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 VSNL1P62760 191 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 DMTNQ08495 405 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 PDE7AQ13946 482 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 ZNHIT3Q15649 155 aaPredicted RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 TSC22D1Q15714 1073 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 TAB1Q15750 504 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 ZNF239Q16600 458 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 PGGHGQ32M88 737 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 CPTPQ5TA50 214 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 ANKRD26P1Q6NSI1 321 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 FRMD7Q6ZUT3 714 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 NUFIP2Q7Z417 695 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 TRABD2AQ86V40 505 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 SLC22A9Q8IVM8 553 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 EIF1ADQ8N9N8 165 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 GATSQ8NAP1 163 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 SLC16A11Q8NCK7 471 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 CDC26Q8NHZ8 85 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 ABHD3Q8WU67 409 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 IFT81Q8WYA0 676 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 CIDECQ96AQ7 238 aaPredicted RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 REG4Q9BYZ8 158 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 C12orf49Q9H741 205 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 TMEM185BQ9H7F4 350 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 COQ10BQ9H8M1 238 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 MID1IP1Q9NPA3 183 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 EQTNQ9NQ60 294 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 MIEF1Q9NQG6 463 aa9.93□□□□□ -0.82
PTPN7-204ENST00000462815 MRTO4Q9UKD2 239 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 MCTS1Q9ULC4 181 aaKnown RBP9.93□□□□□ -0.82
PTPN7-204ENST00000462815 A0A1W2PQD3 144 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 ZNF814B7Z6K7 855 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 OIP5O43482 229 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 NDUFB5O43674 189 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 CD5LO43866 347 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 NDUFS7O75251 213 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 KCNH1O95259 989 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 PLGP00747 810 aaPredicted RBP9.92□□□□□ -0.82
PTPN7-204ENST00000462815 TUBBP07437 444 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 PRPS2P11908 318 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 EDNRAP25101 427 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 CDKN1AP38936 164 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 PRIM2P49643 509 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 FOXF1Q12946 379 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 HSPB3Q12988 150 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 ETFDHQ16134 617 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 DUSP5Q16690 384 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 ZNF672Q499Z4 452 aaPredicted RBP9.92□□□□□ -0.82
PTPN7-204ENST00000462815 SPDYAQ5MJ70 313 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 SFRP5Q5T4F7 317 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 HBMQ6B0K9 141 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 FIGNL1Q6PIW4 674 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 PHC2Q8IXK0 858 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 CDRT4Q8N9R6 151 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 GPR151Q8TDV0 419 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 ROBO4Q8WZ75 1007 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 OSTF1Q92882 214 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 KLHL15Q96M94 604 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 PRRG4Q9BZD6 226 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 TRIM2Q9C040 744 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 TSPYL1Q9H0U9 437 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 SLCO5A1Q9H2Y9 848 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 C3orf14Q9HBI5 128 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 KLHL13Q9P2N7 655 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 RNF115Q9Y4L5 304 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 PTGDR2Q9Y5Y4 395 aa9.92□□□□□ -0.82
PTPN7-204ENST00000462815 GOLGA8QA0A0J9YX86 632 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 EXOC1LA0A1B0GW35 172 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 CCDC151A5D8V7 595 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 GOLGA8OA6NCC3 632 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 DPRXA6NFQ7 191 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 GOLGA8NF8WBI6 632 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 GOLGA8RI6L899 631 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 PDPK1O15530 556 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 GSTA1P08263 222 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 SDC1P18827 310 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ELK4P28324 431 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ADH6P28332 368 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 LCN1P31025 176 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ACVR1BP36896 505 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 MANFP55145 182 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms