RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 WDR75Q8IWA0 830 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 KIRREL3Q8IZU9 778 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 GCNT2Q8N0V5 402 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 WDSUB1Q8N9V3 476 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZFP28Q8NHY6 868 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 OR5P2Q8WZ92 322 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 EFHD2Q96C19 240 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 FAM120BQ96EK7 910 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MARK4Q96L34 752 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 TEX37Q96LM6 180 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZFP3Q96NJ6 502 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 COL21A1Q96P44 957 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MS4A4EQ96PG1 132 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ADOQ96SZ5 270 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MDFIQ99750 246 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 OSBPL11Q9BXB4 747 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 RTN4RQ9BZR6 473 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 BHLHE41Q9C0J9 482 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MANSC1Q9H8J5 431 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 EQTNQ9NQ60 294 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 SERHLQ9NQF3 203 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 AIG1Q9NVV5 245 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZNF446Q9NWS9 450 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MAPRE3Q9UPY8 281 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 EIF3LQ9Y262 564 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 GOLGA8QA0A0J9YX86 632 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 A0A1W2PNV4 684 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 A0A1W2PRB8 838 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 GOLGA8OA6NCC3 632 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 HMGB1P1B2RPK0 211 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 GOLGA8NF8WBI6 632 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 H0Y3Z8 333 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 HDAC3O15379 428 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 EMC8O43402 210 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 HCRTR2O43614 444 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 FADS1O60427 444 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 REM1O75628 298 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZNF708P17019 499 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 LBPP18428 481 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 LOXP28300 417 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 IL12AP29459 219 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 EVI2BP34910 448 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 GPC1P35052 558 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 PNLIPRP2P54317 469 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 CLDN18P56856 261 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 HBA1P69905 142 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 PSPHP78330 225 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 RPP38P78345 283 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 MRPS22P82650 360 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 SNTA1Q13424 505 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 EFR3AQ14156 821 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 LASP1Q14847 261 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 TOMM20Q15388 145 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 DUSP5Q16690 384 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC9B1Q4ZJI4 515 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 CPTPQ5TA50 214 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 OR4F3Q6IEY1 312 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC30A6Q6NXT4 461 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 APOOLQ6UXV4 268 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZAR1Q86SH2 424 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 TRIM42Q8IWZ5 723 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 CLECL1Q8IZS7 167 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 LRRC75A-AS1Q8N1F1 130 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 OR8J2Q8NGG1 315 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 OR1J4Q8NGS1 313 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 FBXO30Q8TB52 745 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 PIK3R3Q92569 461 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 TESCQ96BS2 214 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 INTS12Q96CB8 462 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 OTUB1Q96FW1 271 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 C16orf58Q96GQ5 468 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 TM9SF2Q99805 663 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 DUSP26Q9BV47 211 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 SERHL2Q9H4I8 314 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 WDR55Q9H6Y2 383 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 METTL7AQ9H8H3 244 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLCO1B3Q9NPD5 702 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 GPATCH2Q9NW75 528 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 ARGLU1Q9NWB6 273 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 C6orf203Q9P0P8 240 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 FBXL2Q9UKC9 423 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 WIF1Q9Y5W5 379 aa7.15□□□□□ -1.26
CDC42BPA-210ENST00000462553 TTC36A6NLP5 189 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 A8MXE2 369 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 C9JVG2 144 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 H7C1Q1 480 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 RNASET2O00584 256 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 KCNK2O95069 426 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 IL33O95760 270 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 TGM6O95932 706 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 AVPP01185 164 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 C1QCP02747 245 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 HMGN2P05204 90 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 DDX5P17844 614 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 IL12BP29460 328 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 GABRA3P34903 492 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 CPOXP36551 454 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 CPA2P48052 419 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 STARP49675 285 aa7.14□□□□□ -1.27
CDC42BPA-210ENST00000462553 YLPM1P49750 1951 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms