RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SFXN2Q96NB2 322 aa14.36□□□□□ -0.11
ERCC3-206ENST00000462306 KLHDC3Q9BQ90 382 aa14.36□□□□□ -0.11
ERCC3-206ENST00000462306 PAIP1Q9H074 479 aaKnown RBP14.36□□□□□ -0.11
ERCC3-206ENST00000462306 SAP130Q9H0E3 1048 aa14.36□□□□□ -0.11
ERCC3-206ENST00000462306 FGFR1OP2Q9NVK5 253 aa14.36□□□□□ -0.11
ERCC3-206ENST00000462306 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
ERCC3-206ENST00000462306 PHF3Q92576 2039 aaKnown RBP14.36□□□□□ -0.11
ERCC3-206ENST00000462306 CENPVL1A0A0U1RR11 272 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 KDM4EB2RXH2 506 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 OIP5O43482 229 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 GMFGO60234 142 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 KRT75O95678 551 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 NCF2P19878 526 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 CAPN3P20807 821 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 MDH1P40925 334 aaKnown RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 RNF144AP50876 292 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 ZNF117Q03924 483 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 GPR68Q15743 365 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 ZNF141Q15928 474 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 TMEM44Q2T9K0 475 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 GLYR1Q49A26 553 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 ACSF3Q4G176 576 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 AGKQ53H12 422 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 C6orf10Q5SRN2 563 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 HIST2H2BCQ6DN03 193 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 TYW3Q6IPR3 259 aaKnown RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 AAGABQ6PD74 315 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 ENPP6Q6UWR7 440 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 SEM1Q6ZVN7 128 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 MTERF4Q7Z6M4 381 aaKnown RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 PHOSPHO1Q8TCT1 267 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 RND1Q92730 232 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 ROPN1LQ96C74 230 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 SDCCAG3Q96C92 435 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 SPDL1Q96EA4 605 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 AURKBQ96GD4 344 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-206ENST00000462306 POLE3Q9NRF9 147 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 MKLN1Q9UL63 735 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 CAMK2AQ9UQM7 478 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 RNF6Q9Y252 685 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 DTNAQ9Y4J8 743 aa14.35□□□□□ -0.11
ERCC3-206ENST00000462306 OR2M5A3KFT3 312 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 NR5A2O00482 541 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 KIAA0513O60268 411 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 TNFRSF21O75509 655 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 UGT2B17O75795 530 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ANP32DO95626 131 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 EPPINO95925 133 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 VIMP08670 466 aaKnown RBP14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ZNF708P17019 499 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 COL8A1P27658 744 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ADH7P40394 386 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 MAGEA8P43361 318 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 CLDN18P56856 261 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ZNF630Q2M218 657 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-206ENST00000462306 PAGE3Q5JUK9 113 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 PDZK1Q5T2W1 519 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 METTL21CQ5VZV1 264 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 CBLN3Q6UW01 205 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 FRRS1Q6ZNA5 592 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 OR5M1Q8NGP8 315 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 B4GALNT2Q8NHY0 566 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ZPLD1Q8TCW7 415 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 SH3YL1Q96HL8 342 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-206ENST00000462306 TMEM120AQ9BXJ8 343 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 TPT1P8Q9HAU6 139 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 SLAMF8Q9P0V8 285 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ICAM5Q9UMF0 924 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 ZNF337Q9Y3M9 751 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 PCDHB14Q9Y5E9 798 aa14.34□□□□□ -0.11
ERCC3-206ENST00000462306 KLF2Q9Y5W3 355 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-206ENST00000462306 A0A087WZY1 265 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 A0A096LPI6 279 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 A0A0G2JNJ9 132 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 SERINC4A6NH21 518 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 H3BNH8 94 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 HCRTR2O43614 444 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 TOXO94900 526 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 H6PDO95479 791 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 CLDN14O95500 239 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 TROVE2P10155 538 aaKnown RBP eCLIP14.33□□□□□ -0.12
ERCC3-206ENST00000462306 ANXA11P50995 505 aaKnown RBP14.33□□□□□ -0.12
ERCC3-206ENST00000462306 MAPK11Q15759 364 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 MAPK14Q16539 360 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 BCL2A1Q16548 175 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 SYPL1Q16563 259 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 LRIF1Q5T3J3 769 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 RIPPLY2Q5TAB7 128 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 RAET1LQ5VY80 246 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 NSUN5P2Q63ZY6 315 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 ADGRE4PQ86SQ3 457 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 CCDC71Q8IV32 467 aaPredicted RBP14.33□□□□□ -0.12
ERCC3-206ENST00000462306 MSRB3Q8IXL7 192 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 ZG16BQ96DA0 208 aa14.33□□□□□ -0.12
ERCC3-206ENST00000462306 TRNT1Q96Q11 434 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms