RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ROGDIQ9GZN7 287 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 STMN4Q9H169 189 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 COPS7BQ9H9Q2 264 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 PRTFDC1Q9NRG1 225 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 HEY2Q9UBP5 337 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 HAO1Q9UJM8 370 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF223Q9UK11 482 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 CES1P1Q9UKY3 287 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 EXO1Q9UQ84 846 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 FIS1Q9Y3D6 152 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 MMACHCQ9Y4U1 282 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 DOCK10Q96BY6 2186 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GOLGA6L10A6NI86 522 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 A8MUA0 341 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 TMEM114B3SHH9 223 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PSMD12O00232 456 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PEX12O00623 359 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 LSM1O15116 133 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 RSL1D1O76021 490 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PRB1P04280 392 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PRR35P0CG20 571 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 GALNSP34059 522 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 CASP6P55212 293 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 OR4D2P58180 307 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 FOLH1Q04609 750 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 ASPHQ12797 758 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 AIMP2Q13155 320 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 RFTN2Q52LD8 501 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 RNASE12Q5GAN4 147 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 CCNYL2Q5T2Q4 361 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 NDUFAF5Q5TEU4 345 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 HHATQ5VTY9 493 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 ANKRD16Q6P6B7 361 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PAPD4Q6PIY7 484 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 KIF2BQ8N4N8 673 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF321PQ8N8H1 164 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 APCDD1LQ8NCL9 501 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 ADAMTS18Q8TE60 1221 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 DOK4Q8TEW6 326 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 C16orf78Q8WTQ4 265 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PTPMT1Q8WUK0 201 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 TWIST2Q8WVJ9 160 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PPWD1Q96BP3 646 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 EGLN2Q96KS0 407 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 FCRL1Q96LA6 429 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 FER1L6-AS2Q96M78 137 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PAIP2Q9BPZ3 127 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 CENPKQ9BS16 269 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 TUBB6Q9BUF5 446 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 EBPLQ9BY08 206 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 RPF2Q9H7B2 306 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF71Q9NQZ8 489 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 LYARQ9NX58 379 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 C5AR2Q9P296 337 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 VPS4AQ9UN37 437 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 PPIEQ9UNP9 301 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 TP53TG5Q9Y2B4 290 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 DLGAP4Q9Y2H0 992 aa7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 COPG1Q9Y678 874 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-212ENST00000461239 RELNP78509 3460 aa7.4□□□□□ -1.23
ECHDC1-212ENST00000461239 SPTA1P02549 2419 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 TNRC6AQ8NDV7 1962 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 NSG1A0A0A6YYJ2 146 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ATP6AP2A0A1C7CYW4 349 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 SAGE2PA6NJ88 616 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 LINC00473A8K010 186 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 SLC28A1O00337 649 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 CLDN4O14493 209 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ZNF195O14628 629 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 PCDH7O60245 1069 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 PRKNO60260 465 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ATP6AP2O75787 350 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 DDAH2O95865 285 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 CLPSP04118 112 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 SERPINA7P05543 415 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 IGFBP2P18065 325 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 DUSP1P28562 367 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 TIA1P31483 386 aaKnown RBP eCLIP7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 PCP4P48539 62 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 MAPK12P53778 367 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 SLC26A5P58743 744 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ACSM2AQ08AH3 577 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 STX3Q13277 289 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 BAK1Q16611 211 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 SPIN4Q56A73 249 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 COLEC12Q5KU26 742 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ACSM2BQ68CK6 577 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 FAM71E1Q6IPT2 247 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 NOXRED1Q6NXP6 359 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 H3F3CQ6NXT2 135 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 MZT2BQ6NZ67 158 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 CYP20A1Q6UW02 462 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 IGFL2Q6UWQ7 119 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 PAGE2Q7Z2X7 111 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 CLEC1AQ8NC01 280 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ELP5Q8TE02 316 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 METTL21AQ8WXB1 218 aa7.39□□□□□ -1.23
ECHDC1-212ENST00000461239 ZNF75CPQ92670 426 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms