RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 UBQLN1Q9UMX0 589 aaKnown RBP0.93□□□□□ -2.26
PTPN22-203ENST00000460620 WIF1Q9Y5W5 379 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 NPC1L1Q9UHC9 1359 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 BET1O15155 118 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 ATP6V1G1O75348 118 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 SPAG7O75391 227 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 MRPL3P09001 348 aaKnown RBP0.93□□□□□ -2.26
PTPN22-203ENST00000460620 UROSP10746 265 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 CTNNB1P35222 781 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 MAGEA4P43358 317 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 ZP4Q12836 540 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 NME3Q13232 169 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 ARFRP1Q13795 201 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 CHRFAM7AQ494W8 412 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 KRTAP13-2Q52LG2 175 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 CMPK2Q5EBM0 449 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 DNAJC21Q5F1R6 531 aaKnown RBP0.93□□□□□ -2.26
PTPN22-203ENST00000460620 PAGE3Q5JUK9 113 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 SLX4IPQ5VYV7 408 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 BTNL3Q6UXE8 466 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 KCTD9Q7L273 389 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 GOLGA7Q7Z5G4 137 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 NET1Q7Z628 596 aaPredicted RBP0.93□□□□□ -2.26
PTPN22-203ENST00000460620 HMGN2P46Q86SG4 172 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 AMZ2Q86W34 360 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 CCDC36Q8IYA8 594 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 SYCP3Q8IZU3 236 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 NEK11Q8NG66 645 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 OR6X1Q8NH79 312 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 ART4Q93070 314 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 NRIP2Q9BQI9 281 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 NDUFAF3Q9BU61 184 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 CHIAQ9BZP6 476 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 TMEM245Q9H330 911 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 LHX9Q9NQ69 397 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 PIGVQ9NUD9 493 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 CNIH4Q9P003 139 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 GHRLQ9UBU3 117 aa0.93□□□□□ -2.26
PTPN22-203ENST00000460620 IQANK1A0A1B0GTG1 560 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 A4D1N5 150 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 H3BMH7 237 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 HCN1O60741 890 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 PCCBP05166 539 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 PLEKP08567 350 aaPredicted RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 ZNF18P17022 549 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 BDNFP23560 247 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 TCF7P36402 384 aaPredicted RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 CCL11P51671 97 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 SH3BGRP55822 239 aaPredicted RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 NLRP11P59045 1033 aaKnown RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 HERVK_113P63132 956 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 ERVK-8P63133 956 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 UBE2V2Q15819 145 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 CDKN3Q16667 212 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 AARDQ4LEZ3 155 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 ZSCAN25Q6NSZ9 544 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 C11orf88Q6PI97 169 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 UNQ9370/PRO34162Q6UXP9 181 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 COX15Q7KZN9 410 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 BNIPLQ7Z465 357 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 YRDCQ86U90 279 aaKnown RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 TTC5Q8N0Z6 440 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 OR2T33Q8NG76 320 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 OR52I1Q8NGK6 324 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 LINC00477Q96M19 166 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 ZNF641Q96N77 438 aaPredicted RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 ERVK-6Q9BXR3 956 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 CACNG6Q9BXT2 260 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 POLR2J2Q9GZM3 115 aaKnown RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 POLR2J3Q9H1A7 115 aaKnown RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 COG4Q9H9E3 785 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 MARCOQ9UEW3 520 aaPredicted RBP0.92□□□□□ -2.26
PTPN22-203ENST00000460620 OPN4Q9UHM6 478 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 GMPPBQ9Y5P6 360 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 CLCA3PQ9Y6N3 262 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 SCN2AQ99250 2005 aa0.92□□□□□ -2.26
PTPN22-203ENST00000460620 KAT6BQ8WYB5 2073 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 RAD54L2Q9Y4B4 1467 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 IGKV1D-16P01601 117 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 RNASE2P10153 161 aaKnown RBP0.91□□□□□ -2.26
PTPN22-203ENST00000460620 BCKDHAP12694 445 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 CRISP2P16562 243 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 CELP19835 753 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 COX7A1P24310 79 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 HOXA9P31269 272 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 SSTP61278 116 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 MRPS6P82932 125 aaKnown RBP0.91□□□□□ -2.26
PTPN22-203ENST00000460620 SRYQ05066 204 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 WASHC5Q12768 1159 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 FAM83EQ2M2I3 478 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 DEFB116Q30KQ4 102 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 FAM120AOSQ5T036 256 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 PVRIGQ6DKI7 326 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 ZNF562Q6V9R5 426 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 ACP7Q6ZNF0 438 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 P4HA3Q7Z4N8 544 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 VRK2Q86Y07 508 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 MMAAQ8IVH4 418 aaKnown RBP0.91□□□□□ -2.26
PTPN22-203ENST00000460620 MYOCDQ8IZQ8 938 aa0.91□□□□□ -2.26
PTPN22-203ENST00000460620 OR8H3Q8N146 312 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms