RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 MMGT1Q8N4V1 131 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 CDRT4Q8N9R6 151 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 MAPK1IP1LQ8NDC0 245 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 OR4C3Q8NH37 302 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 CDC26Q8NHZ8 85 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 FAM110BQ8TC76 370 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 NANOS1Q8WY41 292 aaKnown RBP9.29□□□□□ -0.92
HDLBP-227ENST00000458564 PIK3R3Q92569 461 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 SLC9A6Q92581 669 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 CPNE4Q96A23 557 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-227ENST00000458564 KLHL15Q96M94 604 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 SLCO5A1Q9H2Y9 848 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 ESRP2Q9H6T0 727 aaKnown RBP9.29□□□□□ -0.92
HDLBP-227ENST00000458564 KLHL13Q9P2N7 655 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 MAGED1Q9Y5V3 778 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-227ENST00000458564 ANK2Q01484 3957 aa9.29□□□□□ -0.92
HDLBP-227ENST00000458564 SVEP1Q4LDE5 3571 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 CADP27708 2225 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 CR1P17927 2039 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 EXOC1LA0A1B0GW35 172 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 A0A1W2PQD3 144 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 NPIPB8E9PQR5 432 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 UBFD1O14562 309 aaKnown RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 GMFGO60234 142 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 TBX19O60806 448 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 IFNA2P01563 188 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 TP53P04637 393 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 CD3EP07766 207 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 ABHD2P08910 425 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 LINGO3P0C6S8 592 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 PRPS2P11908 318 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 PRPH2P23942 346 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 GCAP28676 217 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 EIF1P41567 113 aaKnown RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 FRKP42685 505 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 NAA20P61599 178 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 HSPB3Q12988 150 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 KIAA0040Q15053 153 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 P2RY6Q15077 328 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 TAB1Q15750 504 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 IMPG1Q17R60 797 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 EXOSC6Q5RKV6 272 aaKnown RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 SFRP5Q5T4F7 317 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 HMBOX1Q6NT76 420 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 NOXRED1Q6NXP6 359 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 SYT10Q6XYQ8 523 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 ZNF551Q7Z340 670 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 DTX2Q86UW9 622 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 TDRPQ86YL5 185 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 CNPY4Q8N129 248 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 OR6Y1Q8NGX8 325 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 CEP70Q8NHQ1 597 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 POC1BQ8TC44 478 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 GPR151Q8TDV0 419 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 ABHD3Q8WU67 409 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 SMAP2Q8WU79 429 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 HSD17B8Q92506 261 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 OSTF1Q92882 214 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 GIMAP5Q96F15 307 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 MS4A4EQ96PG1 132 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 POTEKPQ9BYX7 375 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 TRIM2Q9C040 744 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 IQCGQ9H095 443 aaKnown RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 C12orf49Q9H741 205 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 TMEM185BQ9H7F4 350 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 BARX1Q9HBU1 254 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 MID1IP1Q9NPA3 183 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 EQTNQ9NQ60 294 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 UBQLN4Q9NRR5 601 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 LIPT1Q9Y234 373 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 CCL27Q9Y4X3 112 aa9.28□□□□□ -0.92
HDLBP-227ENST00000458564 POLR3HQ9Y535 204 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-227ENST00000458564 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 A0A1W2PP18 115 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 RNF212BA8MTL3 300 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 KIF2AO00139 706 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-227ENST00000458564 CLOCKO15516 846 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 PDPK1O15530 556 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 KCNK2O95069 426 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 HSPA4LO95757 839 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 IGHV4-39P01824 125 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 GSTA1P08263 222 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 ACP2P11117 423 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 IL32P24001 234 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 ACVR1BP36896 505 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 MANFP55145 182 aaKnown RBP9.27□□□□□ -0.93
HDLBP-227ENST00000458564 CARD18P57730 90 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 PGGHGQ32M88 737 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 TMEM201Q5SNT2 666 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 ZCCHC12Q6PEW1 402 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 FRMD7Q6ZUT3 714 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 SSX8Q7RTT4 187 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 ZAR1Q86SH2 424 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 PHC2Q8IXK0 858 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 LILRA2Q8N149 483 aa9.27□□□□□ -0.93
HDLBP-227ENST00000458564 GATSQ8NAP1 163 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms