RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 COL11A2P13942 1736 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 TRAV26-1A0A087WT03 109 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TEX13DA0A0J9YY54 714 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 A0A1B0GVM2 712 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 A0A1W2PNV4 684 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ILVBLA1L0T0 632 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 FAM92AA1XBS5 289 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NEMP2A6NFY4 417 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TMEM200CA6NKL6 621 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 LOC110117498-PIK3R3F6TDL0 507 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 LEFTY2O00292 366 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 KLF11O14901 512 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CTDSPLO15194 276 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 EMC8O43402 210 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 PRKYO43930 277 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 OR10H3O60404 316 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ADAP1O75689 374 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ZMPSTE24O75844 475 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 BRI3O95415 125 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 VNN1O95497 513 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ACSL3O95573 720 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 MOCS2O96007 188 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 IFNA10P01566 189 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 PPBPP02775 128 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 RAF1P04049 648 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 OCM2P0CE71 109 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ETS2P15036 469 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ACADSP16219 412 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ANXA7P20073 488 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 S1PR1P21453 382 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CXCR2P25025 360 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 KLRC2P26717 231 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NDUFS1P28331 727 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TIA1P31483 386 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-209ENST00000457055 PNPLA4P41247 253 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NDUFV1P49821 464 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 PPT1P50897 306 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 DGKQP52824 942 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 GALCP54803 685 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 RBX1P62877 108 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 IRX4P78413 519 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 MYBPC1Q00872 1141 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 MGAT2Q10469 447 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TARDBPQ13148 414 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-209ENST00000457055 MED21Q13503 144 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 DPYSL3Q14195 570 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 SLC1A5Q15758 541 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 UGCGQ16739 394 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TATDN3Q17R31 274 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TMEM249Q2WGJ8 235 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 AASDHQ4L235 1098 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 DCAF6Q58WW2 860 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 LRIF1Q5T3J3 769 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CYB5R2Q6BCY4 276 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 REEP3Q6NUK4 255 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 SYCE2Q6PIF2 218 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 B3GLCTQ6Y288 498 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 HSDL2Q6YN16 418 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 MRPL21Q7Z2W9 205 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 NET1Q7Z628 596 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 FOXP4Q8IVH2 680 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 FAM219AQ8IW50 185 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 HS3ST5Q8IZT8 346 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 RIBC1Q8N443 379 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 PDPRQ8NCN5 879 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 FBXO36Q8NEA4 188 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 OR2L2Q8NH16 312 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 STOML3Q8TAV4 291 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 GAB3Q8WWW8 586 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 RAB40AQ8WXH6 277 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 STMN2Q93045 179 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 FBXO17Q96EF6 278 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CDKN2AIPNLQ96HQ2 116 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TSSK3Q96PN8 268 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CDCA3Q99618 268 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 AIF1LQ9BQI0 150 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ST6GALNAC5Q9BVH7 336 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TMED9Q9BVK6 235 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 DDA1Q9BW61 102 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ACTRT3Q9BYD9 372 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 YTHDF1Q9BYJ9 559 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 ULBP1Q9BZM6 244 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TRIM9Q9C026 710 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 ZNF430Q9H8G1 570 aaPredicted RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 DDX31Q9H8H2 851 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 ANKZF1Q9H8Y5 726 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 WDR54Q9H977 334 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 MYNNQ9NPC7 610 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NANSQ9NR45 359 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NCKIPSDQ9NZQ3 722 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CNOT8Q9UFF9 292 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 MRM2Q9UI43 246 aaKnown RBP5.01□□□□□ -1.61
VPS41-209ENST00000457055 FBXL3Q9UKT7 428 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 NFU1Q9UMS0 254 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 PSG11Q9UQ72 335 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 TP53TG5Q9Y2B4 290 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 GSTK1Q9Y2Q3 226 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 GOLT1BQ9Y3E0 138 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 CHST2Q9Y4C5 530 aa5.01□□□□□ -1.61
VPS41-209ENST00000457055 PTGDR2Q9Y5Y4 395 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms