RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	OR52B6	Q8NGF0	335 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	WDR20	Q8TBZ3	569 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CDK15	Q96Q40	435 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	ZNF382	Q96SR6	550 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	HDHD5	Q9BXW7	423 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	SHCBP1L	Q9BZQ2	653 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	TRIM2	Q9C040	744 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	PTGES2	Q9H7Z7	377 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	GLRX2	Q9NS18	164 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	FAIM	Q9NVQ4	179 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CLEC4A	Q9UMR7	237 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	PCDHA9	Q9Y5H5	950 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	YLPM1	P49750	1951 aa	Known RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	FREM1	Q5H8C1	2179 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	C1orf226	A1L170	272 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	PPP6C	O00743	305 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	UBFD1	O14562	309 aa	Known RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	POLR3G	O15318	223 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ERAL1	O75616	437 aa	Known RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	BCAS2	O75934	225 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ESRRB	O95718	433 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	CHRNG	P07510	517 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	PCSK2	P16519	638 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ADH6	P28332	368 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	EVI2B	P34910	448 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	SLC1A6	P48664	564 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	NUDT6	P53370	316 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	MAPK12	P53778	367 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	CORO7	P57737	925 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	BST1	Q10588	318 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	TRAF3	Q13114	568 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	LTB4R	Q15722	352 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ELOA3B	Q3SY89	546 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	GLYR1	Q49A26	553 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	CCNYL2	Q5T2Q4	361 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	TTC19	Q6DKK2	380 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	PPP4R4	Q6NUP7	873 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	PAGE2	Q7Z2X7	111 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	GGN	Q86UU5	652 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	KBTBD8	Q8NFY9	601 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ELOA3	Q8NG57	546 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR4F6	Q8NGB9	312 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR5M1	Q8NGP8	315 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	CKAP2	Q8WWK9	683 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	HSD17B8	Q92506	261 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ZNF75CP	Q92670	426 aa	Predicted RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ERP27	Q96DN0	273 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	ADAD1	Q96M93	576 aa	Known RBP	11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	SDHAF3	Q9NRP4	125 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	AHSP	Q9NZD4	102 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	STOML1	Q9UBI4	398 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	PSME2	Q9UL46	239 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	RNF11	Q9Y3C5	154 aa		11.74	□□□□□ -0.53
SNHG17-208	ENST00000456953	KLF11	O14901	512 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	SPRY1	O43609	319 aa	Predicted RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	SCO2	O43819	266 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	LMX1B	O60663	402 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	LYPLA1	O75608	230 aa	Predicted RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR4F21	O95013	312 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	SNUPN	O95149	360 aa	Known RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	ENO1	P06733	434 aa	Known RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	SLC25A16	P16260	332 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	MDH1	P40925	334 aa	Known RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	EIF1AX	P47813	144 aa	Known RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	MRPS35	P82673	323 aa	Known RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	GUCY1A3	Q02108	690 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	BSPH1	Q075Z2	132 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	TAB1	Q15750	504 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	LIPN	Q5VXI9	398 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	LETMD1	Q6P1Q0	360 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	CDYL2	Q8N8U2	506 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	L3MBTL4	Q8NA19	623 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	AGR3	Q8TD06	166 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	PKD1L1	Q8TDX9	2849 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	EFHD2	Q96C19	240 aa	Predicted RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	KLHL29	Q96CT2	875 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	C1GALT1C1	Q96EU7	318 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	MAGEB18	Q96M61	343 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	VSTM2L	Q96N03	204 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	ELOVL6	Q9H5J4	265 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	THAP1	Q9NVV9	213 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	MED11	Q9P086	117 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	MCTS1	Q9ULC4	181 aa	Known RBP	11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	ABCG2	Q9UNQ0	655 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	ZNF780B	Q9Y6R6	833 aa		11.73	□□□□□ -0.53
SNHG17-208	ENST00000456953	PLCE1	Q9P212	2302 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	EIF1AY	O14602	144 aa	Known RBP	11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	ITM2A	O43736	263 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	CHEK2	O96017	543 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	KRT6A	P02538	564 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	KRT6B	P04259	564 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	PGR	P06401	933 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	IGHV4-31	P0DP07	118 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	ZNF16	P17020	682 aa	Predicted RBP	11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	IL32	P24001	234 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	HMOX2	P30519	316 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	KRT6C	P48668	564 aa		11.72	□□□□□ -0.53
SNHG17-208	ENST00000456953	DUSP2	Q05923	314 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms