RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CDRT1O95170 752 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 SOD1P00441 154 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 OTCP00480 354 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 SAGP10523 405 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-218ENST00000456174 RPS2P15880 293 aaKnown RBP7.15□□□□□ -1.26
HDAC9-218ENST00000456174 CXCL2P19875 107 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 RAB4AP20338 218 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 PSMA1P25786 263 aaKnown RBP7.15□□□□□ -1.26
HDAC9-218ENST00000456174 TNFRSF4P43489 277 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 GPR1P46091 355 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 PRLHRP49683 370 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 CASP6P55212 293 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 KIAA1024LP59773 190 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 RAB5BP61020 215 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 SNRPEP62304 92 aaKnown RBP7.15□□□□□ -1.26
HDAC9-218ENST00000456174 KCNJ10P78508 379 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 CAMK2GQ13555 558 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-218ENST00000456174 ENPP2Q13822 863 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 HABP2Q14520 560 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-218ENST00000456174 EXOC3L2Q2M3D2 409 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 PIP5KL1Q5T9C9 394 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 RAET1GQ6H3X3 334 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 TMEM220Q6QAJ8 160 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 MILR1Q7Z6M3 343 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 TMEM17Q86X19 198 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 CACUL1Q86Y37 369 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 KLBQ86Z14 1044 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 ZDHHC21Q8IVQ6 265 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 METTL6Q8TCB7 284 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 C2CD4CQ8TF44 421 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 TMEM159Q96B96 161 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 FCRL1Q96LA6 429 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 PPM1MQ96MI6 270 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 DMRTA2Q96SC8 542 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 SSX3Q99909 188 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 NDUFB11Q9NX14 153 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 NUBP2Q9Y5Y2 271 aa7.15□□□□□ -1.26
HDAC9-218ENST00000456174 FAM220BPB1ANY3 271 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 GFYI3L273 518 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 K7EQS6 105 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 AGRPO00253 132 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 SLC16A5O15375 505 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 DPM1O60762 260 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 STK16O75716 305 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 EPB42P16452 691 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 BTCP35070 178 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 INPP1P49441 399 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 EVX1P49640 407 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 SEC13P55735 322 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 DPTQ07507 201 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 HTR4Q13639 388 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 P2RY14Q15391 338 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 MED22Q15528 200 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 CST6Q15828 149 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 XKR7Q5GH72 579 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 COL13A1Q5TAT6 717 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 TMEM164Q5U3C3 297 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 SCIMPQ6UWF3 145 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 ZNF730Q6ZMV8 503 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 SLC44A2Q8IWA5 706 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 NAGSQ8N159 534 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 ARMC10Q8N2F6 343 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 SLC44A3Q8N4M1 653 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 PLA2G15Q8NCC3 412 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 C11orf65Q8NCR3 313 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 OR5M9Q8NGP3 310 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 OR2T35Q8NGX2 323 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 PEX11GQ96HA9 241 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 MAP3K3Q99759 626 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 VRK1Q99986 396 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 INPP5KQ9BT40 448 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 OR2AG1Q9H205 316 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 CHMP1AQ9HD42 196 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 ENAMQ9NRM1 1142 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 PDP1Q9P0J1 537 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 AKAP7Q9P0M2 348 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 PPP4R1LQ9P1A2 415 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 ZNF69Q9UC07 566 aa7.15□□□□□ -1.27
HDAC9-218ENST00000456174 EXO1Q9UQ84 846 aaKnown RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 CFAP20Q9Y6A4 193 aaKnown RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 DNMT3AQ9Y6K1 912 aaPredicted RBP7.15□□□□□ -1.27
HDAC9-218ENST00000456174 MEX3AA1L020 520 aaKnown RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 L7N2F9 121 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 NPC1O15118 1278 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 MID1O15344 667 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 TPST2O60704 377 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 CDC123O75794 336 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 VIPP01282 170 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 ADRA2AP08913 450 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 PIPP12273 146 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 UGT2B7P16662 529 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 DRD3P35462 400 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 KIR2DL1P43626 348 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 TNFRSF17Q02223 184 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 GK2Q14410 553 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 HLXQ14774 488 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 UBXN2BQ14CS0 331 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 RBMS2Q15434 407 aaKnown RBP7.14□□□□□ -1.27
HDAC9-218ENST00000456174 SPDYE7PQ495Y7 208 aa7.14□□□□□ -1.27
HDAC9-218ENST00000456174 ATP6AP1LQ52LC2 224 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms