RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CCT5P48643 541 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 EEFSECP57772 596 aaKnown RBP14.34□□□□□ -0.11
GPC1-206ENST00000455111 NAA20P61599 178 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 ZNF117Q03924 483 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 ZNF844Q08AG5 666 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 CAPRIN1Q14444 709 aaKnown RBP14.34□□□□□ -0.11
GPC1-206ENST00000455111 TOMM34Q15785 309 aaPredicted RBP14.34□□□□□ -0.11
GPC1-206ENST00000455111 NDUFAF6Q330K2 333 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 GALNTL6Q49A17 601 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 ARL13AQ5H913 290 aaPredicted RBP14.34□□□□□ -0.11
GPC1-206ENST00000455111 SHEQ5VZ18 495 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 ZCCHC23Q6ZST2 131 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 LRRC75A-AS1Q8N1F1 130 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 BANPQ8N9N5 519 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 TWIST2Q8WVJ9 160 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 CDS1Q92903 461 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 MS4A4EQ96PG1 132 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 SRXN1Q9BYN0 137 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 CXorf36Q9H7Y0 433 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 ATP6V1HQ9UI12 483 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.33□□□□□ -0.12
GPC1-206ENST00000455111 TRIM64A6NGJ6 449 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 TRIM64BA6NI03 449 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 TTC36A6NLP5 189 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 NDUFB5O43674 189 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 TRIM13O60858 407 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 HMGN2P05204 90 aaKnown RBP14.33□□□□□ -0.12
GPC1-206ENST00000455111 FGF4P08620 206 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 PSMD4P55036 377 aaKnown RBP14.33□□□□□ -0.12
GPC1-206ENST00000455111 MANFP55145 182 aaKnown RBP14.33□□□□□ -0.12
GPC1-206ENST00000455111 FOXF1Q12946 379 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 PTGR1Q14914 329 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 MLC1Q15049 377 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 EXOC3L2Q2M3D2 409 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 SEZ6L2Q6UXD5 910 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 CCDC63Q8NA47 563 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 OR6K3Q8NGY3 331 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 ROBO4Q8WZ75 1007 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 DTNBP1Q96EV8 351 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 Q96MF0 132 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 SERHL2Q9H4I8 314 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 ANKZF1Q9H8Y5 726 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 C3orf14Q9HBI5 128 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 GPATCH2Q9NW75 528 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 MKS1Q9NXB0 559 aa14.33□□□□□ -0.12
GPC1-206ENST00000455111 ING1Q9UK53 422 aaPredicted RBP14.33□□□□□ -0.12
GPC1-206ENST00000455111 MRTO4Q9UKD2 239 aaKnown RBP14.33□□□□□ -0.12
GPC1-206ENST00000455111 A0A1W2PQD3 144 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 NPIPB9F8W1W9 429 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 H7C1Q1 480 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 KIF2AO00139 706 aaPredicted RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 SCAMP2O15127 329 aaKnown RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 HEXAP06865 529 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 EDNRAP25101 427 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 AGTR1P30556 359 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 KCNJ5P48544 419 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 CLK3P49761 638 aaKnown RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 RPS3AP61247 264 aaKnown RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 RAC1P63000 192 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 LASP1Q14847 261 aaKnown RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 SGCBQ16585 318 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 CPTPQ5TA50 214 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 OLIG3Q7RTU3 272 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 ATG4DQ86TL0 474 aaPredicted RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 TRABD2AQ86V40 505 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 EIF1ADQ8N9N8 165 aaKnown RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 OR2V1Q8NHB1 315 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 LILRB1Q8NHL6 650 aaPredicted RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 CEP70Q8NHQ1 597 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 PSMA8Q8TAA3 256 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 ACTRT2Q8TDY3 377 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 ZBED6CLQ96FA7 236 aaPredicted RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 GMPPAQ96IJ6 420 aaPredicted RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 SLC39A3Q9BRY0 314 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 TMEM204Q9BSN7 226 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 COQ10BQ9H8M1 238 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 ZCCHC3Q9NUD5 404 aaKnown RBP14.32□□□□□ -0.12
GPC1-206ENST00000455111 GIN1Q9NXP7 522 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 ZNF226Q9NYT6 803 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 ICAM5Q9UMF0 924 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
GPC1-206ENST00000455111 A0A087WZY1 265 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 CENPVL1A0A0U1RR11 272 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 ESPNB1AK53 854 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 NPHS1O60500 1241 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 SMPD2O60906 423 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 GCM2O75603 506 aaPredicted RBP14.31□□□□□ -0.12
GPC1-206ENST00000455111 ALOX5P09917 674 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 NEFHP12036 1026 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 KLHL26Q53HC5 615 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 CLEC9AQ6UXN8 241 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 NUFIP2Q7Z417 695 aaKnown RBP14.31□□□□□ -0.12
GPC1-206ENST00000455111 SZRD1Q7Z422 152 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 PRIMA1Q86XR5 153 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 RIMKLAQ8IXN7 391 aa14.31□□□□□ -0.12
GPC1-206ENST00000455111 KRTCAP2Q8N6L1 136 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms