RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OSTF1Q92882 214 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 CRELD1Q96HD1 420 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 CD180Q99467 661 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 KIAA0513O60268 411 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 HTR2AP28223 471 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 CDH11P55287 796 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 COPZ1P61923 177 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 ITGADQ13349 1161 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 DECR1Q16698 335 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 SYT14P1Q58G82 188 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 FCRLBQ6BAA4 426 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 MBOAT2Q6ZWT7 520 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 TMEM203Q969S6 136 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 IFT27Q9BW83 186 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 SERTAD3Q9UJW9 196 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 SATB2Q9UPW6 733 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 MED31Q9Y3C7 131 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 SLITRK5O94991 958 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 CSTAP01040 98 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 FOLR1P15328 257 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 ZNF136P52737 540 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 SNRPGP62308 76 aaKnown RBP12.65□□□□□ -0.38
CLK3-203ENST00000454830 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 HLA-DQA1Q5Y7H0 255 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 TMEM151BQ8IW70 566 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 MCFD2Q8NI22 146 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 FANK1Q8TC84 345 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
CLK3-203ENST00000454830 CNOT2Q9NZN8 540 aaKnown RBP12.65□□□□□ -0.38
CLK3-203ENST00000454830 NKX2-2O95096 273 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 THY1P04216 161 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 OPRL1P41146 370 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 OMPP47874 163 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 FOXL2P58012 376 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 ATP1A4Q13733 1029 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 NSDHLQ15738 373 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 GHDCQ8N2G8 530 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 ANKK1Q8NFD2 765 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 SENP5Q96HI0 755 aaPredicted RBP12.65□□□□□ -0.39
CLK3-203ENST00000454830 ZNF582Q96NG8 517 aaPredicted RBP12.65□□□□□ -0.39
CLK3-203ENST00000454830 LMF1Q96S06 567 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 ELF4Q99607 663 aaPredicted RBP12.65□□□□□ -0.39
CLK3-203ENST00000454830 FUZQ9BT04 418 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 POLDIP3Q9BY77 421 aaKnown RBP12.65□□□□□ -0.39
CLK3-203ENST00000454830 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.39
CLK3-203ENST00000454830 COL6A3P12111 3177 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 UNC119BA6NIH7 251 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 C10orf142B7Z368 130 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 SLC2A10O95528 541 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 FBLP22087 321 aaKnown RBP12.64□□□□□ -0.39
CLK3-203ENST00000454830 RGS6P49758 472 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 NIPAL1Q6NVV3 410 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 POMZP3Q6PJE2 187 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 RASSF6Q6ZTQ3 369 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 OR2T33Q8NG76 320 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 CTHRC1Q96CG8 243 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 FGF21Q9NSA1 209 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 C20orf141Q9NUB4 165 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 CBLCQ9ULV8 474 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 TRAV27A0A087WT01 109 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 GTPBP1O00178 669 aaKnown RBP12.64□□□□□ -0.39
CLK3-203ENST00000454830 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
CLK3-203ENST00000454830 STAT5AP42229 794 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 SLC9A3P48764 834 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 SPHARQ15513 63 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 MOGQ16653 247 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 BMP8AQ7Z5Y6 402 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 OR13C2Q8NGS9 318 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 OR1L3Q8NH93 324 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 BORCS5Q969J3 196 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 DNAJA3Q96EY1 480 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 ART5Q96L15 291 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 TBX5Q99593 518 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 OR51V1Q9H2C8 321 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 TPK1Q9H3S4 243 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.64□□□□□ -0.39
CLK3-203ENST00000454830 MKL2Q9ULH7 1088 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 HRO43593 1189 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 REM1O75628 298 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 IGKV1D-16P01601 117 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 TSPAN19P0C672 248 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 GLB1P16278 677 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 CSTF2P33240 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLK3-203ENST00000454830 HSD17B7P56937 341 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 C1orf216Q8TAB5 229 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 PHOSPHO1Q8TCT1 267 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 ADAMTS18Q8TE60 1221 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 SH3YL1Q96HL8 342 aaPredicted RBP12.64□□□□□ -0.39
CLK3-203ENST00000454830 OR52D1Q9H346 318 aa12.64□□□□□ -0.39
CLK3-203ENST00000454830 A0A1B0GWA3 101 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms