RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TMEM44Q2T9K0 475 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 DCST2Q5T1A1 773 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 ANXA8L1Q5VT79 327 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 FBXW10Q5XX13 1052 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 OR4F3Q6IEY1 312 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 MTERF4Q7Z6M4 381 aaKnown RBP9.63□□□□□ -0.87
DDX39A-203ENST00000454233 WDR75Q8IWA0 830 aaKnown RBP9.63□□□□□ -0.87
DDX39A-203ENST00000454233 LRRC34Q8IZ02 419 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 CNEP1R1Q8N9A8 125 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 VPS37AQ8NEZ2 397 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 OR4A15Q8NGL6 344 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 OR5AK3PQ8NH89 298 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 B4GALNT2Q8NHY0 566 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 PHOSPHO1Q8TCT1 267 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 NUDT8Q8WV74 236 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 ZBTB8AQ96BR9 441 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 OR7D2Q96RA2 312 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 GPATCH1Q9BRR8 931 aaKnown RBP9.63□□□□□ -0.87
DDX39A-203ENST00000454233 NUF2Q9BZD4 464 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 CLEC4MQ9H2X3 399 aaPredicted RBP9.63□□□□□ -0.87
DDX39A-203ENST00000454233 GALNT8Q9NY28 637 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 HAO1Q9UJM8 370 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 EDARQ9UNE0 448 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 NUP214P35658 2090 aaPredicted RBP9.63□□□□□ -0.87
DDX39A-203ENST00000454233 PDZD2O15018 2839 aa9.63□□□□□ -0.87
DDX39A-203ENST00000454233 MED12LQ86YW9 2145 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 ANKRD17O75179 2603 aaKnown RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PCNX3Q9H6A9 2034 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 UQCRHLA0A096LP55 91 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 RNF103-CHMP3A0A140T963 221 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 TMEM120BA0PK00 339 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 C7orf72A4D263 438 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 SHISA8B8ZZ34 492 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 H0YC42 278 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 GTPBP1O00178 669 aaKnown RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 EIF1AYO14602 144 aaKnown RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 MSTNO14793 375 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 TNFSF13O75888 250 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 SMNDC1O75940 238 aaKnown RBP eCLIP9.62□□□□□ -0.876e-8■■□□□ 13.4
DDX39A-203ENST00000454233 NUDT14O95848 222 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 AK1P00568 194 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 MATN1P21941 496 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 ME2P23368 584 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 CPOXP36551 454 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 ATP12AP54707 1039 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 TPD52P55327 224 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 CLDN15P56746 228 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 OCRLQ01968 901 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 FGFBP1Q14512 234 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 DAZAP2Q15038 168 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PON3Q15166 354 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 DPY19L1Q2PZI1 675 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PLPPR5Q32ZL2 321 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PDSS1Q5T2R2 415 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PPP4R4Q6NUP7 873 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 C6orf120Q7Z4R8 191 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 CLECL1Q8IZS7 167 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 GTPBP8Q8N3Z3 284 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 METTL25Q8N6Q8 603 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 ZNF614Q8N883 585 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 OR8J2Q8NGG1 315 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 LINC01560Q8TB33 94 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 FNDC9Q8TBE3 224 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 MGARPQ8TDB4 240 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 FIG4Q92562 907 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 SLC35G5Q96KT7 338 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PRRG4Q9BZD6 226 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 MEAF6Q9HAF1 191 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 RASSF1Q9NS23 344 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 MED17Q9NVC6 651 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PNPOQ9NVS9 261 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 PAQR5Q9NXK6 330 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-203ENST00000454233 NKIRAS1Q9NYS0 192 aa9.62□□□□□ -0.87
DDX39A-203ENST00000454233 SPG11Q96JI7 2443 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 NPIPA5A0A0B4J1W7 369 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 PRSS51A0A1B0GVH4 220 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 TRPC5OSA6NMA1 111 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 A8MXE2 369 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 NPIPA7E9PJI5 369 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 CASKO14936 926 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 GOSR1O95249 250 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 SYNGR4O95473 234 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 CPSF4O95639 269 aaKnown RBP9.61□□□□□ -0.87
DDX39A-203ENST00000454233 NPIPA8P0DM63 369 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 S100A3P33764 101 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 EIF1P41567 113 aaKnown RBP9.61□□□□□ -0.87
DDX39A-203ENST00000454233 SUMO3P55854 103 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-203ENST00000454233 RAC1P63000 192 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 SIRPAP78324 504 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 ZNF117Q03924 483 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 CD226Q15762 336 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 KLHL26Q53HC5 615 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 ATAD3BQ5T9A4 648 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 OGFOD2Q6N063 350 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 C16orf62Q7Z3J2 963 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 GGNQ86UU5 652 aa9.61□□□□□ -0.87
DDX39A-203ENST00000454233 OR5D16Q8NGK9 328 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms