RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 EMC9Q9Y3B6 208 aa24.31■■□□□ 1.48
USP42-204ENST00000451154 PIP5K1BO14986 540 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 CXCL13O43927 109 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 SMPD2O60906 423 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 INHBBP09529 407 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 PSMA4P25789 261 aaKnown RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 ADSLP30566 484 aaPredicted RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 ZNF41P51814 821 aaPredicted RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 CTBP2P56545 445 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 RAC1P63000 192 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 CTU2Q2VPK5 515 aaKnown RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 PLPPR5Q32ZL2 321 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 R3HCC1LQ7Z5L2 792 aaKnown RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 P3H2Q8IVL5 708 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 ACTRT2Q8TDY3 377 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 PIGTQ969N2 578 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 MTERF3Q96E29 417 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 FAM120BQ96EK7 910 aaKnown RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 RNF145Q96MT1 663 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 TMEM185BQ9H7F4 350 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 HHATLQ9HCP6 504 aa24.3■■□□□ 1.48
USP42-204ENST00000451154 SIRT3Q9NTG7 399 aaPredicted RBP24.3■■□□□ 1.48
USP42-204ENST00000451154 UQCRHLA0A096LP55 91 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 A0A0J9YW62 118 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 SCDO00767 359 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 TNFSF11O14788 317 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 ADAMDEC1O15204 470 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 ARHGEF9O43307 516 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 SERPINB4P48594 390 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 EXOSC6Q5RKV6 272 aaKnown RBP24.29■■□□□ 1.48
USP42-204ENST00000451154 BANPQ8N9N5 519 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 OR6K3Q8NGY3 331 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 POC1BQ8TC44 478 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 AGR3Q8TD06 166 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 NUDT8Q8WV74 236 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 ZBTB8AQ96BR9 441 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 CHMP6Q96FZ7 201 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 GMPPAQ96IJ6 420 aaPredicted RBP24.29■■□□□ 1.48
USP42-204ENST00000451154 PIP5K1AQ99755 562 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 ZCCHC3Q9NUD5 404 aaKnown RBP24.29■■□□□ 1.48
USP42-204ENST00000451154 SLC17A7Q9P2U7 560 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 ATP6V1HQ9UI12 483 aa24.29■■□□□ 1.48
USP42-204ENST00000451154 MCTS1Q9ULC4 181 aaKnown RBP24.29■■□□□ 1.48
USP42-204ENST00000451154 NPHS1O60500 1241 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 PEX11AO75192 247 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 SYNGR4O95473 234 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 HMGN2P05204 90 aaKnown RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 LAMP1P11279 417 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 IL11P20809 199 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 LOXP28300 417 aaPredicted RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 LCN1P31025 176 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 PRIM2P49643 509 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 POU6F2P78424 691 aaPredicted RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 LTBQ06643 244 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 LASP1Q14847 261 aaKnown RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 CD226Q15762 336 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 Q5PR19 223 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 LRIG3Q6UXM1 1119 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 OR2V1Q8NHB1 315 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 B4GALNT2Q8NHY0 566 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 CDS1Q92903 461 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 APOPT1Q96IL0 206 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 BTBD2Q9BX70 525 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 ZNF395Q9H8N7 513 aaPredicted RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 PAQR5Q9NXK6 330 aaPredicted RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 SNX8Q9Y5X2 465 aa24.28■■□□□ 1.48
USP42-204ENST00000451154 NSD1Q96L73 2696 aaPredicted RBP24.28■■□□□ 1.48
USP42-204ENST00000451154 C7orf72A4D263 438 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 SS18L1O75177 396 aaPredicted RBP24.27■■□□□ 1.48
USP42-204ENST00000451154 THBDP07204 575 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 FPR1P21462 350 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 HPCAL1P37235 193 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 RNF144AP50876 292 aaPredicted RBP24.27■■□□□ 1.48
USP42-204ENST00000451154 MLC1Q15049 377 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 HBMQ6B0K9 141 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 ESPNLQ6ZVH7 1005 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 MISPQ8IVT2 679 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 OSTF1Q92882 214 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 CCL19Q99731 98 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 EML4Q9HC35 981 aaKnown RBP24.27■■□□□ 1.48
USP42-204ENST00000451154 MKS1Q9NXB0 559 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 GIN1Q9NXP7 522 aa24.27■■□□□ 1.48
USP42-204ENST00000451154 TMEM114B3SHH9 223 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 SCAMP2O15127 329 aaKnown RBP24.26■■□□□ 1.47
USP42-204ENST00000451154 SPAG7O75391 227 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 SLU7O95391 586 aaKnown RBP24.26■■□□□ 1.47
USP42-204ENST00000451154 STAC2Q6ZMT1 411 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 ZCCHC23Q6ZST2 131 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 TRABD2AQ86V40 505 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 LILRA2Q8N149 483 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 LRRC75A-AS1Q8N1F1 130 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 PPP3R2Q96LZ3 170 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 C3orf30Q96M34 536 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 PIGUQ9H490 435 aa24.26■■□□□ 1.47
USP42-204ENST00000451154 A0A1W2PQD3 144 aa24.25■■□□□ 1.47
USP42-204ENST00000451154 KLF4O43474 513 aa24.25■■□□□ 1.47
USP42-204ENST00000451154 LINGO3P0C6S8 592 aa24.25■■□□□ 1.47
USP42-204ENST00000451154 DDX5P17844 614 aaKnown RBP24.25■■□□□ 1.47
USP42-204ENST00000451154 ME2P23368 584 aa24.25■■□□□ 1.47
USP42-204ENST00000451154 CCT3P49368 545 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms