RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 OR8J2Q8NGG1 315 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 ADAMTS15Q8TE58 950 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 FIG4Q92562 907 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 ZBTB8AQ96BR9 441 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 STARD4Q96DR4 205 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 GPATCH1Q9BRR8 931 aaKnown RBP17.46■□□□□ 0.39
USP40-207ENST00000450940 POLDIP3Q9BY77 421 aaKnown RBP17.46■□□□□ 0.39
USP40-207ENST00000450940 CENPHQ9H3R5 247 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 RNF122Q9H9V4 155 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 KCNK9Q9NPC2 374 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 GALNT8Q9NY28 637 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 STOML1Q9UBI4 398 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 FAF1Q9UNN5 650 aaPredicted RBP17.46■□□□□ 0.39
USP40-207ENST00000450940 KCNE3Q9Y6H6 103 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 ABCA4P78363 2273 aa17.46■□□□□ 0.39
USP40-207ENST00000450940 NPIPB9F8W1W9 429 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 SCDO00767 359 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 ANKRD28O15084 1053 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 GOSR1O95249 250 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 HPGDP15428 266 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 KIR2DL2P43627 348 aaPredicted RBP17.45■□□□□ 0.38
USP40-207ENST00000450940 GUSBP1Q15486 140 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 CD226Q15762 336 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 PGS1Q32NB8 556 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 PLPPR5Q32ZL2 321 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 KLHL26Q53HC5 615 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 BHLHB9Q6PI77 547 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 P4HA3Q7Z4N8 544 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
USP40-207ENST00000450940 LUZP2Q86TE4 346 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 LINC01560Q8TB33 94 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 PINK1Q9BXM7 581 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 MED17Q9NVC6 651 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 VDAC3Q9Y277 283 aa17.45■□□□□ 0.38
USP40-207ENST00000450940 SHISA8B8ZZ34 492 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 RNASET2O00584 256 aaKnown RBP17.44■□□□□ 0.38
USP40-207ENST00000450940 CFLARO15519 480 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 SEC14L5O43304 696 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 SCN2BO60939 215 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 SLC18A1P54219 525 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 RPS3AP61247 264 aaKnown RBP17.44■□□□□ 0.38
USP40-207ENST00000450940 BST1Q10588 318 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 SPDYE7PQ495Y7 208 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 DCST2Q5T1A1 773 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 OR4F3Q6IEY1 312 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 GATSQ8NAP1 163 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 B4GALNT2Q8NHY0 566 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 FNDC9Q8TBE3 224 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 NRGNQ92686 78 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 TESCQ96BS2 214 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 ZNF845Q96IR2 970 aaPredicted RBP17.44■□□□□ 0.38
USP40-207ENST00000450940 ADGRG7Q96K78 797 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 NPAS1Q99742 590 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 KLHDC3Q9BQ90 382 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 CLEC4MQ9H2X3 399 aaPredicted RBP17.44■□□□□ 0.38
USP40-207ENST00000450940 MEAF6Q9HAF1 191 aa17.44■□□□□ 0.38
USP40-207ENST00000450940 MED13LQ71F56 2210 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 ADAMDEC1O15204 470 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 GMFGO60234 142 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 CGAP01215 116 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 LINGO3P0C6S8 592 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 ATP6V1C1P21283 382 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 ATP12AP54707 1039 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 WDR4P57081 412 aaKnown RBP17.43■□□□□ 0.38
USP40-207ENST00000450940 RAC1P63000 192 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 PHC1P78364 1004 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 PON3Q15166 354 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 AP1ARQ63HQ0 302 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 OGFOD2Q6N063 350 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 C6orf120Q7Z4R8 191 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 BTLAQ7Z6A9 289 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 CDC20BQ86Y33 519 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 WDR75Q8IWA0 830 aaKnown RBP17.43■□□□□ 0.38
USP40-207ENST00000450940 CLECL1Q8IZS7 167 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 ZNF527Q8NB42 609 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 CHDHQ8NE62 594 aaPredicted RBP17.43■□□□□ 0.38
USP40-207ENST00000450940 POC1BQ8TC44 478 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 NINJ1Q92982 152 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 CHMP6Q96FZ7 201 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 PPP1R36Q96LQ0 422 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 DACH2Q96NX9 599 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 OR7D2Q96RA2 312 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 SDF2Q99470 211 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 DPY30Q9C005 99 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 ICAM5Q9UMF0 924 aa17.43■□□□□ 0.38
USP40-207ENST00000450940 HEATR5AQ86XA9 2040 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 MAP1AP78559 2803 aaPredicted RBP17.42■□□□□ 0.38
USP40-207ENST00000450940 PRSS51A0A1B0GVH4 220 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 DUXAA6NLW8 204 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 FCGR2AP12318 317 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 LBPP18428 481 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 CPA2P48052 419 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 ZNF41P51814 821 aaPredicted RBP17.42■□□□□ 0.38
USP40-207ENST00000450940 ZNF117Q03924 483 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 FGFBP1Q14512 234 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 CTU2Q2VPK5 515 aaKnown RBP17.42■□□□□ 0.38
USP40-207ENST00000450940 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.42■□□□□ 0.38
USP40-207ENST00000450940 VWA1Q6PCB0 445 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 OR5AK3PQ8NH89 298 aa17.42■□□□□ 0.38
USP40-207ENST00000450940 MIPOL1Q8TD10 442 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms