RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 COL4A3Q01955 1670 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZAR1LA6NP61 321 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 GATBO75879 557 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 POP4O95707 220 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 CRYBA1P05813 215 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 H1F0P07305 194 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 FPR3P25089 353 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 S100A11P31949 105 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 FABP5Q01469 135 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 GK2Q14410 553 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 NAGSQ8N159 534 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 MRGPRX3Q96LB0 322 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 HHIPQ96QV1 700 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 MTERF1Q99551 399 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 DDX31Q9H8H2 851 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 EXOSC1Q9Y3B2 195 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 A0A1B0GVC2 190 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 A6NIN4 97 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 C5orf67F2Z3F1 127 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 GPR31O00270 319 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 GPR37L1O60883 481 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 HPP00738 406 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 UQCRC2P22695 453 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 DGKGP49619 791 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 ILKQ13418 452 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 CCDC157Q569K6 752 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 MBOAT1Q6ZNC8 495 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 QSOX2Q6ZRP7 698 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 KRT77Q7Z794 578 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 LAS2Q8IYD9 372 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 LNX2Q8N448 690 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 UCK1Q9HA47 277 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 ISYNA1Q9NPH2 558 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 UFSP2Q9NUQ7 469 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 PAPLNO95428 1278 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 KLK3P07288 261 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 RD3LP0DJH9 198 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 P2RY4P51582 365 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DOC2AQ14183 400 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 AGTRAPQ6RW13 159 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 PHOSPHO1Q8TCT1 267 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 IRF7Q92985 503 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 LINC00597Q9H2U6 94 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 C5orf42Q9H799 3197 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 A0A1B0GW55 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 A0A1W2PRB8 838 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 PRR23D1E9PI22 279 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 GFYI3L273 518 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 GRM6O15303 877 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 FGF19O95750 216 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 RHOP08100 348 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 C1SP09871 688 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4L2P0CJ85 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4L3P0CJ86 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4L4P0CJ87 422 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4L5P0CJ88 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4L6P0CJ89 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4L7P0CJ90 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 PRR23D2P0DMB1 279 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 ARAFP10398 606 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 SFTPCP11686 197 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 FEN1P39748 380 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 VEGFCP49767 419 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 GPR143P51810 404 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 PSMD4P55036 377 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 PLPP4Q5VZY2 271 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 TSEN54Q7Z6J9 526 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 TMEM17Q86X19 198 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 LDLRAD3Q86YD5 345 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 ADGRG2Q8IZP9 1017 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR4C15Q8NGM1 316 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR5M9Q8NGP3 310 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR2A12Q8NGT7 310 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR14A16Q8NHC5 309 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 SETD7Q8WTS6 366 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC6A20Q9NP91 592 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 TDP1Q9NUW8 608 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 DUX4Q9UBX2 424 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 A0A1B0GTQ1 180 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 ARHGEF33A8MVX0 844 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 FBP1P09467 338 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 GABRA1P14867 456 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 PAICSP22234 425 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 GPX4P36969 197 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 XCR1P46094 333 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 WNT3P56703 355 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 BCDIN3DQ7Z5W3 292 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 NAXDQ8IW45 347 aa12.59□□□□□ -0.39
SYNGAP1-204ENST00000449372 TOMM5Q8N4H5 51 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms