RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PRAMEF20Q5VT98 475 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 DEF8Q6ZN54 512 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 RBM45Q8IUH3 476 aaKnown RBP13.41□□□□□ -0.26
TNF-208ENST00000449264 LACC1Q8IV20 430 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 ZDHHC21Q8IVQ6 265 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 ZCCHC14Q8WYQ9 949 aaKnown RBP13.41□□□□□ -0.26
TNF-208ENST00000449264 CNOT9Q92600 299 aaKnown RBP13.41□□□□□ -0.26
TNF-208ENST00000449264 TTC9Q92623 222 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 CHID1Q9BWS9 393 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 GALNT9Q9HCQ5 603 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 ALG1L2C9J202 215 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 H3BNH8 94 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 NDUFB5O43674 189 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 GMFGO60234 142 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 MGRN1O60291 552 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 FADS1O60427 444 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 DIRAS1O95057 198 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 BAG2O95816 211 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 NGFRP08138 427 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 GKN3PP0CG01 181 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 UBL4AP11441 157 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 YAP1P46937 504 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 CYB561P49447 251 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 CLK3P49761 638 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 CCR4P51679 360 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 HOXC5Q00444 222 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 PLAURQ03405 335 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 KCNC4Q03721 635 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 ISLR2Q6UXK2 745 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 FDCSPQ8NFU4 85 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 APOBEC4Q8WW27 367 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 DUS3LQ96G46 650 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 SH3YL1Q96HL8 342 aaPredicted RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 ARHGDIGQ99819 225 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 RTN4RQ9BZR6 473 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 DNAJB12Q9NXW2 375 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 PLA2G3Q9NZ20 509 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 ABCG2Q9UNQ0 655 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 SLC35A3Q9Y2D2 325 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 ANGPTL1O95841 491 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 CCL3P10147 92 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 HLCSP50747 726 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 SOX8P57073 446 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 NRF1Q16656 503 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 FNDC7Q5VTL7 733 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 RTL4Q6ZR62 310 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 CMIPQ8IY22 773 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 OR6T1Q8NGN1 323 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 OIT3Q8WWZ8 545 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 UTP23Q9BRU9 249 aaKnown RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 AMBRA1Q9C0C7 1298 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 ZNF552Q9H707 407 aaPredicted RBP13.4□□□□□ -0.26
TNF-208ENST00000449264 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 IL1RAPQ9NPH3 570 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 ARMC1Q9NVT9 282 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 CARD8Q9Y2G2 431 aa13.4□□□□□ -0.26
TNF-208ENST00000449264 A0A1W2PQD3 144 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 G3V3Y1 287 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 OIP5O43482 229 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 HCRTR2O43614 444 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 WDPCPO95876 746 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 MAGEA2P43356 314 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 TMPRSS3P57727 454 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 TUBA3CQ13748 450 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 NPTX1Q15818 432 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 TUBA3EQ6PEY2 450 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 MDGA2Q7Z553 956 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 APLFQ8IW19 511 aaPredicted RBP13.39□□□□□ -0.27
TNF-208ENST00000449264 PAPD5Q8NDF8 572 aaKnown RBP13.39□□□□□ -0.27
TNF-208ENST00000449264 LRTOMTQ8WZ04 291 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 OSBPL11Q9BXB4 747 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 LRFN1Q9P244 771 aa13.39□□□□□ -0.27
TNF-208ENST00000449264 CACNA1GO43497 2377 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 J3KTA2 159 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 K7ENP7 123 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 ZNF264O43296 627 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
TNF-208ENST00000449264 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 PRG2P13727 222 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 RYKP34925 604 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 CD96P40200 585 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 CASP3P42574 277 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 SESN3P58005 492 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 ZNF117Q03924 483 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 FOXD4Q12950 439 aaPredicted RBP13.38□□□□□ -0.27
TNF-208ENST00000449264 MFAP5Q13361 173 aa13.38□□□□□ -0.27
TNF-208ENST00000449264 GANABQ14697 944 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms