RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 A0A1W2PPM1 405 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 DBX1A6NMT0 343 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MANBAO00462 879 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SRPX2O60687 465 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GSTP1P09211 210 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 OR12D1P0DN82 309 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 DPP4P27487 766 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GABRR2P28476 465 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TPPP2P59282 170 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TARBP2Q15633 366 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MEP1AQ16819 746 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 KLBQ86Z14 1044 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ANKRD53Q8N9V6 530 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 LILRB4Q8NHJ6 448 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MMABQ96EY8 250 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 PECRQ9BY49 303 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MAGIXQ9H6Y5 334 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 FAM237AA0A1B0GTK4 181 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SMIM30A4D0T7 59 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 FSCN2O14926 492 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 STBD1O95210 358 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 NAA10P41227 235 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SORDQ00796 357 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 IL10RBQ08334 325 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SCARF1Q14162 830 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 GRINAQ7Z429 371 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CPNE8Q86YQ8 564 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 TUSC5Q8IXB3 177 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 OR10Z1Q8NGY1 313 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SHDQ96IW2 340 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ATG101Q9BSB4 218 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 FAM155AB1AL88 458 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 MATN3O15232 486 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 LILRB3O75022 631 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CPNE6O95741 557 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 MMP2P08253 660 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CRISP2P16562 243 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 PCBD1P61457 104 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 PTPRCAPQ14761 206 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 POU4F3Q15319 338 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF239Q16600 458 aaKnown RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 OTOP3Q7RTS5 596 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 PIGWQ7Z7B1 504 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 DCBLD1Q8N8Z6 715 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 OR8J3Q8NGG0 315 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 WFIKKN2Q8TEU8 576 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 MBOAT4Q96T53 435 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 C11orf84Q9BUA3 381 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 PORCNQ9H237 461 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 EP300Q09472 2414 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 M0R3H8 397 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SLC31A1O15431 190 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ADH1BP00325 375 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 OR8U8P0C7N1 319 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CORO1AP31146 461 aaKnown RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 DAP3P51398 398 aaKnown RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 BRAT1Q6PJG6 821 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 UBE3DQ7Z6J8 389 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF573Q86YE8 665 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 MAP4K3Q8IVH8 894 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM151BQ8IW70 566 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 OR13J1Q8NGT2 312 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 BORCS6Q96GS4 357 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF317Q96PQ6 595 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 GATA5Q9BWX5 397 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 ARHGAP39Q9C0H5 1083 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SLCO5A1Q9H2Y9 848 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 FKRPQ9H9S5 495 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SARDHQ9UL12 918 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 COPS3Q9UNS2 423 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 FER1L6Q2WGJ9 1857 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM235A6NFC5 223 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 A6NIZ1 184 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 RGS11O94810 467 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 MTHFD2P13995 350 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 AOC1P19801 751 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 BCL6P41182 706 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 RAP1BP61224 184 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CLINT1Q14677 625 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SHEQ5VZ18 495 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 PLD6Q8N2A8 252 aaKnown RBP8.48□□□□□ -1.05
NIPBL-202ENST00000448238 OR10Q1Q8NGQ4 319 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SAMD8Q96LT4 415 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 KCNH6Q9H252 994 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 EBF2Q9HAK2 575 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 KCNG2Q9UJ96 466 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 FAM166BA8MTA8 275 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 BMPR1BO00238 502 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 SERPINA2P20848 420 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 BMPR1AP36894 532 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 GSK3BP49841 420 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CLDN6P56747 220 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 DUSP6Q16828 381 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CLEC12BQ2HXU8 276 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 CERS5Q8N5B7 392 aa8.48□□□□□ -1.05
NIPBL-202ENST00000448238 NUS1Q96E22 293 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms