RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CBSLP0DN79 551 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 CELP19835 753 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 ELAVL4P26378 380 aaKnown RBP17.96■□□□□ 0.47
HMGA1-205ENST00000447654 CBSP35520 551 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 CCR9P51686 369 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 YBEYP58557 167 aaPredicted RBP17.96■□□□□ 0.47
HMGA1-205ENST00000447654 AP3S2P59780 193 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 CDK6Q00534 326 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 CDK5Q00535 292 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 GAB1Q13480 694 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 ZNF235Q14590 738 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 PRAMEF13Q5VWM6 474 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 ZNF626Q68DY1 528 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 OR5M10Q6IEU7 315 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 PGBD2Q6P3X8 592 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 SFXN4Q6P4A7 337 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 TRIM40Q6P9F5 258 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 LINGO4Q6UY18 593 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 FAM122BQ7Z309 247 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 TBC1D19Q8N5T2 526 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 EID2Q8N6I1 236 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 POGLUT1Q8NBL1 392 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 SMIM4Q8WVI0 70 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 GSDMCQ9BYG8 508 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 CACYBPQ9HB71 228 aaKnown RBP17.96■□□□□ 0.47
HMGA1-205ENST00000447654 DMRT1Q9Y5R6 373 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 PHYHO14832 338 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 YY2O15391 372 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 GREM1O60565 184 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 RECKO95980 971 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 WNT1P04628 370 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 URODP06132 367 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 MGMTP16455 207 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 NR2C2APQ86WQ0 139 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 SERPINA12Q8IW75 414 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 NFKBIDQ8NI38 313 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 TRMT10AQ8TBZ6 339 aaKnown RBP17.96■□□□□ 0.46
HMGA1-205ENST00000447654 C2orf15Q8WU43 125 aaKnown RBP17.96■□□□□ 0.46
HMGA1-205ENST00000447654 CXorf40BQ96DE9 158 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 IGSF21Q96ID5 467 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 SPON2Q9BUD6 331 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 SLC38A1Q9H2H9 487 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 CHD7Q9P2D1 2997 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 RASD1Q9Y272 281 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 PLEKHM1Q9Y4G2 1056 aa17.96■□□□□ 0.46
HMGA1-205ENST00000447654 PDE4DIPQ5VU43 2346 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 A0A1B0GTQ1 180 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 C2orf92A0A1B0GVN3 265 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 CD8B2A6NJW9 211 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 HOXA2O43364 376 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 TSPAN3O60637 253 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 STX11O75558 287 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 STC2O76061 302 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 TRBC1P01850 177 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 ANKRD34CP0C6C1 535 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 SAGP10523 405 aaPredicted RBP17.95■□□□□ 0.46
HMGA1-205ENST00000447654 CD8BP10966 210 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 TYRP1P17643 537 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 DRD5P21918 477 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 GIPRP48546 466 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 RAB8AP61006 207 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 DGCR2P98153 550 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 TRAM1Q15629 374 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 SLC6A19Q695T7 634 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 CERS6Q6ZMG9 384 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 MRGPREQ86SM8 312 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 SLC9B2Q86UD5 537 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 SLC39A7Q92504 469 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 GTF3AQ92664 365 aaKnown RBP17.95■□□□□ 0.46
HMGA1-205ENST00000447654 PHYHIPLQ96FC7 376 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 CMTM3Q96MX0 182 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 OPN4Q9UHM6 478 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 NUP214P35658 2090 aaPredicted RBP17.95■□□□□ 0.46
HMGA1-205ENST00000447654 SCN8AQ9UQD0 1980 aa17.95■□□□□ 0.46
HMGA1-205ENST00000447654 KDM4EB2RXH2 506 aaPredicted RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 IMPA2O14732 288 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 FFAR1O14842 300 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 IGFBP1P08833 259 aaPredicted RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 IRF1P10914 325 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 EPORP19235 508 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 FAM74A1Q5RGS3 127 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 TMEM88Q6PEY1 159 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 SMAP2Q8WU79 429 aaPredicted RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 APOBEC4Q8WW27 367 aaKnown RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 TCF7L1Q9HCS4 588 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 CA10Q9NS85 328 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 SLC22A11Q9NSA0 550 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 GULP1Q9UBP9 304 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 NPFFR2Q9Y5X5 522 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 NUDT19A8MXV4 375 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 GPR31O00270 319 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 H1F0P07305 194 aaKnown RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ANXA5P08758 320 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ALPIP09923 528 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ARAFP10398 606 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 ETFAP13804 333 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 HSD3B1P14060 373 aa17.94■□□□□ 0.46
HMGA1-205ENST00000447654 CORO1AP31146 461 aaKnown RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 MNX1P50219 401 aaPredicted RBP17.94■□□□□ 0.46
HMGA1-205ENST00000447654 BCL2L1Q07817 233 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms