RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF136P52737 540 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 FXYD6P3P58550 94 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 FCN2Q15485 313 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 LTB4RQ15722 352 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 TBC1D3GQ6DHY5 549 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 MFSD12Q6NUT3 480 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 ANKRD54Q6NXT1 300 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF836Q6ZNA1 936 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 NRROSQ86YC3 692 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 GPALPP1Q8IXQ4 340 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 SLC16A11Q8NCK7 471 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 OR2L3Q8NG85 312 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 KISS1RQ969F8 398 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-204ENST00000447182 GPR137Q96N19 417 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 MS4A4EQ96PG1 132 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 PRSS27Q9BQR3 290 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 EMC7Q9NPA0 242 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 APOBEC3BQ9UH17 382 aaKnown RBP17.76■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF223Q9UK11 482 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-204ENST00000447182 ING4Q9UNL4 249 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 A0A0G2JK05 382 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 DAPL1A0PJW8 107 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 PRR23AA6NEV1 266 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 NOS1APO75052 506 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 ESCO2Q56NI9 601 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 ZBTB37Q5TC79 503 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 SIGIRRQ6IA17 410 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 PXKQ7Z7A4 578 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 ADGRD2Q7Z7M1 963 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 GPR135Q8IZ08 494 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 RNF113BQ8IZP6 322 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 LNX2Q8N448 690 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 LRRC17Q8N6Y2 441 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 MFSD9Q8NBP5 474 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 OR52L1Q8NGH7 329 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 ART5Q96L15 291 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 RANBP3Q9H6Z4 567 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 SNRNP200O75643 2136 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 GOLGA4Q13439 2230 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 SC5DO75845 299 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 MT-ND5P03915 603 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 TAS2R43P59537 309 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 RAB8AP61006 207 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 EEF1A1P68104 462 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 NTRK2Q16620 822 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 ARHGAP11BQ3KRB8 267 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 EIPR1Q53HC9 387 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 BCL2L15Q5TBC7 163 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 FAM111BQ6SJ93 734 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 IL20RBQ6UXL0 311 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 FBXL6Q8N531 539 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 OR52E1Q8NGJ3 308 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 FANK1Q8TC84 345 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 C10orf90Q96M02 699 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 HS6ST2Q96MM7 605 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 NDC1Q9BTX1 674 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 CACYBPQ9HB71 228 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 SIDT1Q9NXL6 827 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 PTTG3PQ9NZH4 202 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 TMA7Q9Y2S6 64 aaKnown RBP17.75■□□□□ 0.43
SDCBP-204ENST00000447182 WDR45Q9Y484 360 aa17.75■□□□□ 0.43
SDCBP-204ENST00000447182 LAMA2P24043 3122 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 SLC22A31A6NKX4 558 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 EEF1E1O43324 174 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 RNGTTO60942 597 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 SOX30O94993 753 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 THBS1P07996 1170 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 CLTBP09497 229 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TBXA2RP21731 343 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ITGB8P26012 769 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 STOMP27105 288 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TEAD1P28347 426 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 STXBP1P61764 594 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 HTRA4P83105 476 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 DUSP8Q13202 625 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 IKZF1Q13422 519 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 AGERQ15109 404 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 SFTPA1Q8IWL2 248 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ELMOD2Q8IZ81 293 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 OR7G2Q8NG99 324 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ZFPM2Q8WW38 1151 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 SUSD6Q92537 303 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 CDS1Q92903 461 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ABHD1Q96SE0 405 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 CD180Q99467 661 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TIMM29Q9BSF4 260 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 DPH1Q9BZG8 443 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 DPAGT1Q9H3H5 408 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 WDR26Q9H7D7 661 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 MED20Q9H944 212 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 SYNPO2LQ9H987 977 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 PRSS16Q9NQE7 514 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 MBNL1Q9NR56 388 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TEKT2Q9UIF3 430 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 OR1A2Q9Y585 309 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 NUBP2Q9Y5Y2 271 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ZC3H12DA2A288 527 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TRAPPC13A5PLN9 417 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 OTOL1A6NHN0 477 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms