RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 C12orf65Q9H3J6 166 aaKnown RBP18.3■□□□□ 0.52
APTR-205ENST00000447009 FANCFQ9NPI8 374 aa18.3■□□□□ 0.52
APTR-205ENST00000447009 SH3BP4Q9P0V3 963 aa18.3■□□□□ 0.52
APTR-205ENST00000447009 H3BQF6 201 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 TUBBP07437 444 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 NGFRP08138 427 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 HPGDP15428 266 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 SDC1P18827 310 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 IL11P20809 199 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 ME2P23368 584 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 PSMA4P25789 261 aaKnown RBP18.29■□□□□ 0.52
APTR-205ENST00000447009 SHC1P29353 583 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 SFTPDP35247 375 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 MANFP55145 182 aaKnown RBP18.29■□□□□ 0.52
APTR-205ENST00000447009 ZNF844Q08AG5 666 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 CPTPQ5TA50 214 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 MFSD12Q6NUT3 480 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 ESPNLQ6ZVH7 1005 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 OR2T11Q8NH01 316 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 POC1BQ8TC44 478 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 AKAP1Q92667 903 aaKnown RBP eCLIP18.29■□□□□ 0.52
APTR-205ENST00000447009 ZBED6CLQ96FA7 236 aaPredicted RBP18.29■□□□□ 0.52
APTR-205ENST00000447009 C16orf58Q96GQ5 468 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 REEP4Q9H6H4 257 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 GLRX2Q9NS18 164 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 ZNF701Q9NV72 531 aaPredicted RBP18.29■□□□□ 0.52
APTR-205ENST00000447009 C1orf109Q9NX04 203 aa18.29■□□□□ 0.52
APTR-205ENST00000447009 C7orf72A4D263 438 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 SLC28A1O00337 649 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 SCDO00767 359 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 ADAMDEC1O15204 470 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 ALOX5P09917 674 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 PRPH2P23942 346 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 PRIM2P49643 509 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 RNF144AP50876 292 aaPredicted RBP18.28■□□□□ 0.52
APTR-205ENST00000447009 DNAJB13P59910 316 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 NAA20P61599 178 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 RPL38P63173 70 aaKnown RBP18.28■□□□□ 0.52
APTR-205ENST00000447009 FOXF1Q12946 379 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 TSC22D1Q15714 1073 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 CD226Q15762 336 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 PDSS1Q5T2R2 415 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 IFT20Q8IY31 132 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 ZNF611Q8N823 705 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 COX18Q8N8Q8 333 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 OR6Y1Q8NGX8 325 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 RAB3IL1Q8TBN0 382 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 FAM110BQ8TC76 370 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 ACTRT2Q8TDY3 377 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 OSTF1Q92882 214 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 S100PBPQ96BU1 408 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 CHMP6Q96FZ7 201 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 KLHL15Q96M94 604 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 CCT7Q99832 543 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 BAIAP2L1Q9UHR4 511 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 GPR52Q9Y2T5 361 aa18.28■□□□□ 0.52
APTR-205ENST00000447009 RGS14O43566 566 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 PLIN3O60664 434 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 NTN1O95631 604 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 PAX1P15863 534 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 ZNF239Q16600 458 aaKnown RBP18.27■□□□□ 0.52
APTR-205ENST00000447009 CCDC153Q494R4 210 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 GSPT2Q8IYD1 628 aaKnown RBP18.27■□□□□ 0.52
APTR-205ENST00000447009 B4GALNT2Q8NHY0 566 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 ABHD3Q8WU67 409 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 ZNF764Q96H86 408 aaPredicted RBP18.27■□□□□ 0.52
APTR-205ENST00000447009 METTL2AQ96IZ6 378 aaKnown RBP18.27■□□□□ 0.52
APTR-205ENST00000447009 TACO1Q9BSH4 297 aaKnown RBP18.27■□□□□ 0.52
APTR-205ENST00000447009 TMEM204Q9BSN7 226 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 IQCGQ9H095 443 aaKnown RBP18.27■□□□□ 0.52
APTR-205ENST00000447009 HHATLQ9HCP6 504 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 UBQLN4Q9NRR5 601 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 ADAM21Q9UKJ8 722 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 LAMP3Q9UQV4 416 aa18.27■□□□□ 0.52
APTR-205ENST00000447009 FREM1Q5H8C1 2179 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 CLOCKO15516 846 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 PSMB1P20618 241 aaKnown RBP18.26■□□□□ 0.51
APTR-205ENST00000447009 FRKP42685 505 aaPredicted RBP18.26■□□□□ 0.51
APTR-205ENST00000447009 CARD18P57730 90 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 RPS4XP62701 263 aaKnown RBP18.26■□□□□ 0.51
APTR-205ENST00000447009 TNK1Q13470 666 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 Q6ZSR9 355 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 NUFIP2Q7Z417 695 aaKnown RBP18.26■□□□□ 0.51
APTR-205ENST00000447009 TRABD2AQ86V40 505 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 MISPQ8IVT2 679 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 LILRA2Q8N149 483 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 ZNF619Q8N2I2 560 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 MAPK1IP1LQ8NDC0 245 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 RNF128Q8TEB7 428 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 FCRL1Q96LA6 429 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 SRXN1Q9BYN0 137 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 OXSMQ9NWU1 459 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 GIN1Q9NXP7 522 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 NTMQ9P121 344 aa18.26■□□□□ 0.51
APTR-205ENST00000447009 CHD3Q12873 2000 aaKnown RBP18.25■□□□□ 0.51
APTR-205ENST00000447009 NPIPA5A0A0B4J1W7 369 aa18.25■□□□□ 0.51
APTR-205ENST00000447009 SMIM23A6NLE4 172 aa18.25■□□□□ 0.51
APTR-205ENST00000447009 NPIPA7E9PJI5 369 aa18.25■□□□□ 0.51
APTR-205ENST00000447009 NPIPB8E9PQR5 432 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms