RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 DUXAA6NLW8 204 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 AHRRA9YTQ3 701 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 HMGN4O00479 90 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 NR5A2O00482 541 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 HCRTR2O43614 444 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 TOXO94900 526 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 MRPL19P49406 292 aaKnown RBP13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ATP12AP54707 1039 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 CLDN18P56856 261 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF117Q03924 483 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 GANABQ14697 944 aaKnown RBP13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF630Q2M218 657 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ARHGAP11BQ3KRB8 267 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 KLHL26Q53HC5 615 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 PDZK1Q5T2W1 519 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 HEPHL1Q6MZM0 1159 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 AAGABQ6PD74 315 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ENPP6Q6UWR7 440 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 LIX1LQ8IVB5 337 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 PM20D2Q8IYS1 436 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 UBQLNLQ8IYU4 475 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 TRIML2Q8N7C3 387 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 NAXEQ8NCW5 288 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 TNIP2Q8NFZ5 429 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ARSGQ96EG1 525 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 DTNBP1Q96EV8 351 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 AURKBQ96GD4 344 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF350Q9GZX5 532 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 EXD2Q9NVH0 621 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 CCDC167Q9P0B6 97 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF337Q9Y3M9 751 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 KLF2Q9Y5W3 355 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-204ENST00000446876 A0A0G2JND7 137 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 OR2M5A3KFT3 312 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 H0YC42 278 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 H3BML4 177 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 STX11O75558 287 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 SOX30O94993 753 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ANP32DO95626 131 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 EPPINO95925 133 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 AK1P00568 194 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 SNRPB2P08579 225 aaKnown RBP13.41□□□□□ -0.26
HDAC4-204ENST00000446876 HOXD4P09016 255 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-204ENST00000446876 CPN1P15169 458 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF708P17019 499 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 POU3F2P20265 443 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-204ENST00000446876 CHMP24386 653 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 CHRNB4P30926 498 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 PTGER4P35408 488 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 TPD52P55327 224 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-204ENST00000446876 GUCY1A3Q02108 690 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 LRRC74AQ0VAA2 488 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ATAD3BQ5T9A4 648 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-204ENST00000446876 TYW3Q6IPR3 259 aaKnown RBP13.41□□□□□ -0.26
HDAC4-204ENST00000446876 CBLN3Q6UW01 205 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ANKFN1Q8N957 763 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF527Q8NB42 609 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 B4GALNT2Q8NHY0 566 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ZFP90Q8TF47 636 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ASB5Q8WWX0 329 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 SMPDL3BQ92485 455 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ROPN1LQ96C74 230 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 ITCHQ96J02 903 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 HOXD1Q9GZZ0 328 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 RMND5AQ9H871 391 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 MED17Q9NVC6 651 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 CARD8Q9Y2G2 431 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 DTNAQ9Y4J8 743 aa13.41□□□□□ -0.26
HDAC4-204ENST00000446876 MED12LQ86YW9 2145 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 SEC14L5O43304 696 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 KIAA0513O60268 411 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 UGT2B17O75795 530 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 AGR2O95994 175 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 NCF2P19878 526 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-204ENST00000446876 CAPN3P20807 821 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 CLDN15P56746 228 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 RCAN2Q14206 197 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 SQLEQ14534 574 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 MAPK14Q16539 360 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 SYPL1Q16563 259 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 TMEM44Q2T9K0 475 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 PLPPR5Q32ZL2 321 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 GPAT3Q53EU6 434 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 AGKQ53H12 422 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 RIPPLY2Q5TAB7 128 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 NSUN5P2Q63ZY6 315 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 CGB2Q6NT52 195 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 BLOC1S3Q6QNY0 202 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 FRRS1Q6ZNA5 592 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 MSANTD1Q6ZTZ1 278 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 LACC1Q8IV20 430 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 MISPQ8IVT2 679 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 C9orf106Q8NAJ2 232 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 GTF2H4Q92759 462 aa13.4□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF524Q96C55 264 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms