RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SWI5Q1ZZU3 235 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SOWAHCQ53LP3 525 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 WDR53Q7Z5U6 358 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 GKN2Q86XP6 184 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 OR51L1Q8NGJ5 315 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RHNO1Q9BSD3 238 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SLC2A4RGQ9NR83 387 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF226Q9NYT6 803 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 ARID2Q68CP9 1835 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 TRDV1A0A1B0GX56 115 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 OR2AT4A6NND4 320 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 H3BSH0 61 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 GTF2F2P13984 249 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PRKAR1BP31321 381 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PRPS1P60891 318 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 CSNK1G2P78368 415 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PRAMEF8Q5VWM4 474 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PRAMEF7Q5VXH5 474 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SFRP4Q6FHJ7 346 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PHC2Q8IXK0 858 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SLC35F2Q8IXU6 374 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SIMC1Q8NDZ2 872 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 ZDHHC5Q9C0B5 715 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 QRSL1Q9H0R6 528 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 IL21RQ9HBE5 538 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SLC35A3Q9Y2D2 325 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 NOP16Q9Y3C1 178 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 IGLV3-16A0A075B6K0 115 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 TMEM129A0AVI4 362 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 NAP1L6A6NFF2 107 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 POLR1CO15160 346 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 GDI2P50395 445 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 CAV3P56539 151 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 TCEAL5Q5H9L2 206 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 TMEM64Q6YI46 380 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 MBOAT2Q6ZWT7 520 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 CAMKMTQ7Z624 323 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RELTQ969Z4 430 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 OR51J1Q9H342 316 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RNF167Q9H6Y7 350 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RANGRFQ9HD47 186 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 ACTR10Q9NZ32 417 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 USP36Q9P275 1121 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 GPN3Q9UHW5 284 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 MRPS17Q9Y2R5 130 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PAPPA2Q9BXP8 1791 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 TRIM64CA6NLI5 447 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RFPL3O75679 317 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 CPMP14384 443 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 OR1Q1Q15612 314 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 SYT14P1Q58G82 188 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 BCDIN3DQ7Z5W3 292 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 TMEM17Q86X19 198 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 OR2T35Q8NGX2 323 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 C4orf36Q96KX1 117 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 EVA1BQ9NVM1 165 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 HCN3Q9P1Z3 774 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 PRAMEF2O60811 474 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 PRAF2O60831 178 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 KDM4BO94953 1096 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 DRD5P21918 477 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 FPR3P25089 353 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 FRKP42685 505 aaPredicted RBP15.58■□□□□ 0.09
TCOF1-206ENST00000445265 PSPHP78330 225 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 AKIRIN2Q53H80 203 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 LEG1Q6P5S2 330 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 THAP6Q8TBB0 222 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 CREB3L4Q8TEY5 395 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 HOXD1Q9GZZ0 328 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 ABRACLQ9P1F3 81 aa15.58■□□□□ 0.09
TCOF1-206ENST00000445265 TESQ9UGI8 421 aaKnown RBP15.58■□□□□ 0.09
TCOF1-206ENST00000445265 DISC1C4P0D8 188 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 UPK1AO00322 258 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 PHYHO14832 338 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 CDC40O60508 579 aaKnown RBP eCLIP15.58■□□□□ 0.089e-7■■■□□ 18.5
TCOF1-206ENST00000445265 GPX5O75715 221 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 S100A9P06702 114 aaKnown RBP15.58■□□□□ 0.08
TCOF1-206ENST00000445265 TRAPPC2P0DI81 140 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 TRAPPC2BP0DI82 140 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 APEX1P27695 318 aaKnown RBP15.58■□□□□ 0.08
TCOF1-206ENST00000445265 FCRLBQ6BAA4 426 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 SLC25A24Q6NUK1 477 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 FAM180AQ6UWF9 173 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 GRPRP30550 384 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 IRS1P35568 1242 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 TGFBR1P36897 503 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 AKR1D1P51857 326 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 ERVFC1P60507 584 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 ARFRP1Q13795 201 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 RPE65Q16518 533 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 CCNJQ5T5M9 372 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 TECPR1Q7Z6L1 1165 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 ADIPOR2Q86V24 386 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 PLA2G15Q8NCC3 412 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 FGF13Q92913 245 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 EID2BQ96D98 161 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 SCGB3A2Q96PL1 93 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 HDAC8Q9BY41 377 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 IER3IP1Q9Y5U9 82 aa15.58■□□□□ 0.08
TCOF1-206ENST00000445265 NUP214P35658 2090 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms