RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 DEPPQ9NTK1 212 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 ZDHHC18Q9NUE0 388 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 SMOXQ9NWM0 555 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 C6orf203Q9P0P8 240 aaPredicted RBP3.3□□□□□ -1.88
LINC01004-201ENST00000445184 MLXQ9UH92 298 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 RSPH14Q9UHP6 348 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 CTNNA3Q9UI47 895 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 CYTH4Q9UIA0 394 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 OR10H1Q9Y4A9 318 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 SLCO1B1Q9Y6L6 691 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 LAMA3Q16787 3333 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 ZDBF2Q9HCK1 2354 aa3.3□□□□□ -1.88
LINC01004-201ENST00000445184 BRD4O60885 1362 aaPredicted RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 NSD2O96028 1365 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 KANK1Q14678 1352 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 MTUS2Q5JR59 1369 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 MAPK8IP3Q9UPT6 1336 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 GSAPA4D1B5 854 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 EPM2AB3EWF7 344 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 HHLA1C9JL84 531 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ZNF264O43296 627 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 RANBP6O60518 1105 aaKnown RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 MAGEC1O60732 1142 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ECI2O75521 394 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TM7SF2O76062 418 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TPM3P06753 285 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CFC1P0CG37 223 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TSPAN8P19075 237 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ATP6V1C1P21283 382 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 PRKACGP22612 351 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 UQCRC2P22695 453 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 PDHA2P29803 388 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ID1P41134 155 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 STK19P49842 368 aaPredicted RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 SULT1E1P49888 294 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TNFRSF17Q02223 184 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 PJVKQ0ZLH3 352 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CALCOCO2Q13137 446 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 FAM189A2Q15884 450 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 SYPL1Q16563 259 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CAMK4Q16566 473 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 MTHFSDQ2M296 383 aaKnown RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CCDC57Q2TAC2 916 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TMEM30BQ3MIR4 351 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TMEM52BQ4KMG9 183 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 TCHHL1Q5QJ38 904 aaPredicted RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 FAM71F2Q6NXP2 309 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 LCLAT1Q6UWP7 414 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 BTNL3Q6UXE8 466 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 KRT222Q8N1A0 295 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ICA1LQ8NDH6 482 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 PCNPQ8WW12 178 aaKnown RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 PIBF1Q8WXW3 757 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 NPY6RQ99463 290 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 APOOQ9BUR5 198 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 COMMD4Q9H0A8 199 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 WDR41Q9HAD4 459 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 IL1RL2Q9HB29 575 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 DCAF13Q9NV06 445 aaKnown RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 BARHL2Q9NY43 387 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 RNF14Q9UBS8 474 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ASIC3Q9UHC3 531 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 CRLS1Q9UJA2 301 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 SMAD5-AS1Q9Y6J3 95 aa3.29□□□□□ -1.88
LINC01004-201ENST00000445184 V9GYY5 206 aaPredicted RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 LAMA2P24043 3122 aaKnown RBP3.29□□□□□ -1.88
LINC01004-201ENST00000445184 ROCK2O75116 1388 aaKnown RBP3.28□□□□□ -1.88
LINC01004-201ENST00000445184 MUC6Q6W4X9 2439 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 IGLON5A6NGN9 336 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 NEDD8-MDP1E9PL57 170 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ARPC3O15145 178 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 CFLARO15519 480 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 PDE5AO76074 875 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 IGHV3-9P01782 118 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 UGT2B4P06133 528 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 GSTA1P08263 222 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 BCKDHAP12694 445 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ZNF44P15621 663 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 POU3F4P49335 361 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 CSRP3P50461 194 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 SNRPD1P62314 119 aaKnown RBP3.28□□□□□ -1.88
LINC01004-201ENST00000445184 SARNPP82979 210 aaKnown RBP3.28□□□□□ -1.88
LINC01004-201ENST00000445184 IL9RQ01113 521 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ZNF33BQ06732 778 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 DDX39BQ13838 428 aaKnown RBP3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ELAVL3Q14576 367 aaKnown RBP3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ATXN7L3Q14CW9 347 aaPredicted RBP3.28□□□□□ -1.88
LINC01004-201ENST00000445184 EMC2Q15006 297 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ZNF146Q15072 292 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 PCK2Q16822 640 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 C17orf58Q2M2W7 97 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 FAM182AQ5T1J6 154 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 WLSQ5T9L3 541 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 TPGS2Q68CL5 300 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 KLHDC8BQ8IXV7 354 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 ZNF485Q8NCK3 441 aa3.28□□□□□ -1.88
LINC01004-201ENST00000445184 NUP37Q8NFH4 326 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms