RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 PRPH2P23942 346 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 PRKAG1P54619 331 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CTBP2P56545 445 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 RAC1P63000 192 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 TNK1Q13470 666 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CD226Q15762 336 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 DUSP5Q16690 384 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 RFTN2Q52LD8 501 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CCNJQ5T5M9 372 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CPTPQ5TA50 214 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 IKBIPQ70UQ0 350 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 WDR75Q8IWA0 830 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 ZNF611Q8N823 705 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 EIF1ADQ8N9N8 165 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 MAPK1IP1LQ8NDC0 245 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 NUP43Q8NFH3 380 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 OR2V1Q8NHB1 315 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CLHC1Q8NHS4 586 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 CCDC126Q96EE4 140 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 SH3YL1Q96HL8 342 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 RNF145Q96MT1 663 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 MECRQ9BV79 373 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 ACTR6Q9GZN1 396 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 C3orf14Q9HBI5 128 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 MED17Q9NVC6 651 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 NTMQ9P121 344 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 SLC17A7Q9P2U7 560 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 WBP11Q9Y2W2 641 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 FBN3Q75N90 2809 aa12.65□□□□□ -0.38
SMARCAL1-210ENST00000445153 NUP214P35658 2090 aaPredicted RBP12.65□□□□□ -0.39
SMARCAL1-210ENST00000445153 FBN1P35555 2871 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 COPEO14579 308 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 HS3ST1O14792 307 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 PDPK1O15530 556 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 OIP5O43482 229 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 AKAP10O43572 662 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 SOX30O94993 753 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 NGFRP08138 427 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 UROSP10746 265 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 AGTR1P30556 359 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 UGT3A2Q3SY77 523 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 LIPMQ5VYY2 423 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 NUFIP2Q7Z417 695 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 ATG4DQ86TL0 474 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 TMEM171Q8WVE6 324 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 AKAP1Q92667 903 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 OSTF1Q92882 214 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 NEUROG1Q92886 237 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 FIS1Q9Y3D6 152 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
SMARCAL1-210ENST00000445153 A0A087WZY1 265 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 C7orf72A4D263 438 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 GCM2O75603 506 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 PSMB1P20618 241 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 GPC1P35052 558 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 FRKP42685 505 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 CCT5P48643 541 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 PRIM2P49643 509 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 RNF144AP50876 292 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 ATP5J2P56134 94 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 VSNL1P62760 191 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 PDE7AQ13946 482 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 KANK2Q63ZY3 851 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 HBMQ6B0K9 141 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 BEND4Q6ZU67 534 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 CDRT4Q8N9R6 151 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 ACTRT2Q8TDY3 377 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 ABHD3Q8WU67 409 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 ZBTB8AQ96BR9 441 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 S100PBPQ96BU1 408 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 TSSK3Q96PN8 268 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 SRXN1Q9BYN0 137 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 LRTM1Q9HBL6 345 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 MCTS1Q9ULC4 181 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 GPR52Q9Y2T5 361 aa12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 ANK3Q12955 4377 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-210ENST00000445153 OVOL3O00110 214 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 AZIN1O14977 448 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 LSM1O15116 133 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 TBX19O60806 448 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 SYNGR4O95473 234 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 SOD3P08294 240 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 LINC00032P0C843 101 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 ALDH3A1P30838 453 aa12.62□□□□□ -0.39
SMARCAL1-210ENST00000445153 MANFP55145 182 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms