RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ACTRT2Q8TDY3 377 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 ZC3HAV1LQ96H79 300 aaKnown RBP18.88■□□□□ 0.61
VSX1-206ENST00000444511 RNF145Q96MT1 663 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 BTBD2Q9BX70 525 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 KLHL4Q9C0H6 718 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 MED17Q9NVC6 651 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 FBXO34Q9NWN3 711 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 SLC17A7Q9P2U7 560 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 GIMAP2Q9UG22 337 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 ATP6V1HQ9UI12 483 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 MCTS1Q9ULC4 181 aaKnown RBP18.88■□□□□ 0.61
VSX1-206ENST00000444511 SNX8Q9Y5X2 465 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 C7orf72A4D263 438 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 PEX11AO75192 247 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 SPAG7O75391 227 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 SYNGR4O95473 234 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 OPN1LWP04000 364 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 HMGN2P05204 90 aaKnown RBP18.87■□□□□ 0.61
VSX1-206ENST00000444511 ME2P23368 584 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 RAC1P63000 192 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 IFFO1Q0D2I5 559 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 LASP1Q14847 261 aaKnown RBP18.87■□□□□ 0.61
VSX1-206ENST00000444511 PLPPR5Q32ZL2 321 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 ATP6AP1LQ52LC2 224 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 CPTPQ5TA50 214 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 ZCCHC23Q6ZST2 131 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 OR7A2PQ8NGA2 310 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 OR6K3Q8NGY3 331 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 GMPPAQ96IJ6 420 aaPredicted RBP18.87■□□□□ 0.61
VSX1-206ENST00000444511 L2HGDHQ9H9P8 463 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 DUSP22Q9NRW4 184 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 SIRT3Q9NTG7 399 aaPredicted RBP18.87■□□□□ 0.61
VSX1-206ENST00000444511 CLEC4AQ9UMR7 237 aa18.87■□□□□ 0.61
VSX1-206ENST00000444511 A0A1W2PQD3 144 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 CXCL13O43927 109 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 ATP6V1C1P21283 382 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 XKR7Q5GH72 579 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 EXOSC6Q5RKV6 272 aaKnown RBP18.86■□□□□ 0.61
VSX1-206ENST00000444511 PDSS1Q5T2R2 415 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 SHEQ5VZ18 495 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 ANKRD34AQ69YU3 496 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 CXorf67Q86X51 503 aaPredicted RBP18.86■□□□□ 0.61
VSX1-206ENST00000444511 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 B4GALNT2Q8NHY0 566 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 CDS1Q92903 461 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 PIGTQ969N2 578 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 ADGRG7Q96K78 797 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 STACQ99469 402 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 NPAS1Q99742 590 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 PIGUQ9H490 435 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 TMEM185BQ9H7F4 350 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 UBTD1Q9HAC8 227 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 ATAD3AQ9NVI7 634 aa18.86■□□□□ 0.61
VSX1-206ENST00000444511 TNFSF11O14788 317 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 ADAMDEC1O15204 470 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 ARHGEF9O43307 516 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 SS18L1O75177 396 aaPredicted RBP18.85■□□□□ 0.61
VSX1-206ENST00000444511 SLU7O95391 586 aaKnown RBP18.85■□□□□ 0.61
VSX1-206ENST00000444511 NUDT17P0C025 328 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 LAMP1P11279 417 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 PSMA4P25789 261 aaKnown RBP18.85■□□□□ 0.61
VSX1-206ENST00000444511 SERPINB5P36952 375 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 PTGR1Q14914 329 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 CD226Q15762 336 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 CTU2Q2VPK5 515 aaKnown RBP18.85■□□□□ 0.61
VSX1-206ENST00000444511 SPDYE7PQ495Y7 208 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 HBMQ6B0K9 141 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 ESPNLQ6ZVH7 1005 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 P3H2Q8IVL5 708 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 ZNF527Q8NB42 609 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 TCP10LQ8TDR4 215 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 OR5P2Q8WZ92 322 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 CAVIN3Q969G5 261 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 C18orf12Q96KH6 178 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 C1orf50Q9BV19 199 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 PLSCR4Q9NRQ2 329 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 LGALS13Q9UHV8 139 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 FAF1Q9UNN5 650 aaPredicted RBP18.85■□□□□ 0.61
VSX1-206ENST00000444511 ACANP16112 2415 aa18.85■□□□□ 0.61
VSX1-206ENST00000444511 SMPD2O60906 423 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 LYPLA1O75608 230 aaPredicted RBP18.84■□□□□ 0.61
VSX1-206ENST00000444511 FPR1P21462 350 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 CCT3P49368 545 aaKnown RBP18.84■□□□□ 0.61
VSX1-206ENST00000444511 TP53BP2Q13625 1128 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 ACKR1Q16570 336 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 CDC73Q6P1J9 531 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 BIVMQ86UB2 503 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 KRTAP1-3Q8IUG1 177 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 NATD1Q8N6N6 113 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 FNDC5Q8NAU1 212 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 OR56A1Q8NGH5 318 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 POC1BQ8TC44 478 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 PHOSPHO1Q8TCT1 267 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 ADAMTS15Q8TE58 950 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 PRPF18Q99633 342 aaKnown RBP18.84■□□□□ 0.61
VSX1-206ENST00000444511 PIP5K1AQ99755 562 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 ACTRT3Q9BYD9 372 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 ANKZF1Q9H8Y5 726 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 FANCFQ9NPI8 374 aa18.84■□□□□ 0.61
VSX1-206ENST00000444511 GLRX2Q9NS18 164 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms