RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SERPIND1P05546 499 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 ERCC1P07992 297 aaPredicted RBP5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 RNF224P0DH78 156 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 RD3LP0DJH9 198 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 GIMD1P0DJR0 217 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 ITGAMP11215 1152 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TPSB2P20231 275 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 S1PR1P21453 382 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 HTR2AP28223 471 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 DUSP1P28562 367 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CRABP1P29762 137 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 HPCAL1P37235 193 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 MAGEA6P43360 314 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NSFP46459 744 aaKnown RBP5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TAS2R60P59551 318 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TPSAB1Q15661 275 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 DLG2Q15700 870 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 C5orf64Q2M2E5 130 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CHRFAM7AQ494W8 412 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CDC42EP5Q6NZY7 148 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 RNASEKQ6P5S7 137 aaKnown RBP5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 SYCE2Q6PIF2 218 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 LINC00299Q6ZSB3 139 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CENPUQ71F23 418 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 HDDC2Q7Z4H3 204 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TDRPQ86YL5 185 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 KLBQ86Z14 1044 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CYP4Z2PQ8N1L4 340 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 GTPBP8Q8N3Z3 284 aaPredicted RBP5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 FAM110DQ8TAY7 271 aaPredicted RBP5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TCP10LQ8TDR4 215 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 XAGE5Q8WWM1 108 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 S100ZQ8WXG8 99 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 AP3S1Q92572 193 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 R3HDM4Q96D70 268 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CDKN2AIPNLQ96HQ2 116 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 PPP1R16AQ96I34 528 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 C3orf30Q96M34 536 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TRIM51Q9BSJ1 452 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TRIM9Q9C026 710 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 SLC38A1Q9H2H9 487 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 ELOVL6Q9H5J4 265 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NSUN3Q9H649 340 aaKnown RBP5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 LYRM4Q9HD34 91 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 HMG20AQ9NP66 347 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TAS2R9Q9NYW1 312 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CA5BQ9Y2D0 317 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CSNK1G3Q9Y6M4 447 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 URGCP-MRPS24S4R325 110 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 QSER1Q2KHR3 1735 aa5.45□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 A0A087WXM4 84 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 A0A1W2PR77 199 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 LNP1A1A4G5 178 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 SMCO3A2RU48 225 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 F8W036 122 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 H3BMQ9 156 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 H3BNH8 94 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NDUFS4O43181 175 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 SSX4O60224 188 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 PEX10O60683 326 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 RAD51DO75771 328 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NADKO95544 446 aaPredicted RBP5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TFP02787 698 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 SERPINA5P05154 406 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 HOXB5P09067 269 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 RRASP10301 218 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 FCGR1AP12314 374 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 EDN2P20800 178 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 ACKR3P25106 362 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TIA1P31483 386 aaKnown RBP eCLIP5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CDH5P33151 784 aaPredicted RBP5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 MAS1LP35410 378 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CLCN3P51790 818 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 OR2B6P58173 313 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NHLH2Q02577 135 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 CXCL9Q07325 125 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 GRM7Q14831 915 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 PSG3Q16557 428 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 ATP13A5Q4VNC0 1218 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 MTX3Q5HYI7 312 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 KIAA1755Q5JYT7 1200 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 METRNLQ641Q3 311 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TIGD3Q6B0B8 471 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 UGT3A1Q6NUS8 523 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 C5orf46Q6UWT4 87 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 DPY19L3Q6ZPD9 716 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NIPA1Q7RTP0 329 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 TECPR1Q7Z6L1 1165 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 DTX2Q86UW9 622 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 DTX1Q86Y01 620 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 C12orf29Q8N999 325 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 GATSQ8NAP1 163 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 OR4C5Q8NGB2 326 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 OR5M8Q8NGP6 311 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 OR10J5Q8NHC4 309 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 NANPQ8TBE9 248 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 UBTD2Q8WUN7 234 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 MAFIPQ8WZ33 124 aa5.44□□□□□ -1.54
ALMS1-IT1-201ENST00000441587 PIK3R3Q92569 461 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms