RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 GCGRP47871 477 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 ZIC1Q15915 447 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 CDC73Q6P1J9 531 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 ERN2Q76MJ5 926 aaKnown RBP14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 TMEM255BQ8WV15 326 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 HGDQ93099 445 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 SLC41A3Q96GZ6 507 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 SAMD8Q96LT4 415 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 UBQLN3Q9H347 655 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 KLHL31Q9H511 634 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 TRIM36Q9NQ86 728 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 KLHL28Q9NXS3 571 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 TRAV6A0A075B6T7 132 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 FAM183AA6NL82 134 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 C4orf51C9J302 202 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 CDC42EP2O14613 210 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 ZIC2O95409 532 aaPredicted RBP14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 ADRB3P13945 408 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 HSD17B12Q53GQ0 312 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 TIGD4Q8IY51 512 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 TMIEQ8NEW7 156 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 TTLQ8NG68 377 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 OR11H4Q8NGC9 324 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 OTUB2Q96DC9 234 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 FN3KQ9H479 309 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 NARFLQ9H6Q4 476 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 IL20RAQ9UHF4 553 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 CES1P1Q9UKY3 287 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 ATG4BQ9Y4P1 393 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 IRAK3Q9Y616 596 aa14.22□□□□□ -0.13
CDC42EP4-202ENST00000439510 PAICSP22234 425 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 RGS8P57771 180 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 ST8SIA6P61647 398 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 RGS1Q08116 209 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 TRAM1Q15629 374 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 COL28A1Q2UY09 1125 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 MEPCEQ7L2J0 689 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 TMEM99Q8N816 258 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 OR5W2Q8NH69 310 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 BRIX1Q8TDN6 353 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 MCHR1Q99705 422 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 MTIF3Q9H2K0 278 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 OR51J1Q9H342 316 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 ERVMER34-1Q9H9K5 563 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 ZNF222Q9UK12 451 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 STON1Q9Y6Q2 735 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 BTN3A3O00478 584 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 PLPP2O43688 288 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 TCRBP04435 133 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 ZGLP1P0C6A0 271 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 HIST1H1TP22492 207 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 AHRP35869 848 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 OR10A3P58181 314 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 RAB8AP61006 207 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 PRDX1Q06830 199 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 GALEQ14376 348 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 TMEM52BQ4KMG9 183 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 C9orf64Q5T6V5 341 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 PLBD1Q6P4A8 553 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 SPERTQ8NA61 448 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 NUP43Q8NFH3 380 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 GANCQ8TET4 914 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 PRDM7Q9NQW5 492 aa14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 ZNF624Q9P2J8 865 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP4-202ENST00000439510 NOTCH4Q99466 2003 aa14.21□□□□□ -0.14
CDC42EP4-202ENST00000439510 SC5DO75845 299 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 AIFM1O95831 613 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 CEBPEQ15744 281 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 SLC48A1Q6P1K1 146 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 ADAMTSL4Q6UY14 1074 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 KRT74Q7RTS7 529 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 PXKQ7Z7A4 578 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 LRRTM4Q86VH4 590 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 BMPERQ8N8U9 685 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 DTX3Q8N9I9 347 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 CXorf40AQ8TE69 158 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 KISS1RQ969F8 398 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 MS4A6EQ96DS6 147 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 ART5Q96L15 291 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 SORCS2Q96PQ0 1159 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 INPP5EQ9NRR6 644 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 TM7SF3Q9NS93 570 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 COPZ2Q9P299 210 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 NUP50Q9UKX7 468 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 TEX13CA0A0J9YWL9 993 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 A0A1W2PS29 197 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 FZD7O75084 574 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 CSNK2A2P19784 350 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 TBXA2RP21731 343 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 MC3RP41968 323 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 SRP9P49458 86 aaKnown RBP14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 FAM27D1Q5T7N8 215 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 ACOT4Q8N9L9 421 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 OR8K5Q8NH50 307 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 TRMT10AQ8TBZ6 339 aaKnown RBP14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 PHOSPHO2Q8TCD6 241 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 WFIKKN2Q8TEU8 576 aa14.2□□□□□ -0.14
CDC42EP4-202ENST00000439510 ELP4Q96EB1 424 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms