RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 GPX5O75715 221 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 UQCRBP14927 111 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 XRCC1P18887 633 aaPredicted RBP2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 FUT3P21217 361 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 GNPDA1P46926 289 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 NOVA1P51513 510 aaKnown RBP2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 LIM2P55344 173 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 OSTNP61366 133 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 LRRC36Q1X8D7 754 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TFDP3Q5H9I0 405 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 EOGTQ5NDL2 527 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 PLBD1Q6P4A8 553 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 WASH2PQ6VEQ5 465 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 CYS1Q717R9 158 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 C17orf82Q86X59 251 aaPredicted RBP2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 EFCAB13Q8IY85 973 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 MRPL43Q8N983 215 aaKnown RBP2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ZSCAN4Q8NAM6 433 aaPredicted RBP2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 STKLD1Q8NE28 680 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 OR2A12Q8NGT7 310 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ANKRD49Q8WVL7 239 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 IL1F10Q8WWZ1 152 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 NEIL2Q969S2 332 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SAMD8Q96LT4 415 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SMIM14Q96QK8 99 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 PLEKHF1Q96S99 279 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 CAB39LQ9H9S4 337 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ROPN1Q9HAT0 212 aaPredicted RBP2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 CRLS1Q9UJA2 301 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 PPIAL4AQ9Y536 164 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ABCC4O15439 1325 aa2.3□□□□□ -2.04
UPP2-IT1-201ENST00000439185 MYO10Q9HD67 2058 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 PARD3Q8TEW0 1356 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 RNF103-CHMP3A0A140T963 221 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 LRRC30A6NM36 301 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TRIM49D1C9J1S8 452 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 MMP23AO75900 390 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 RRASP10301 218 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 IGLL1P15814 213 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 STMN1P16949 149 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 VDAC1P21796 283 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 GABRR1P24046 479 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 LRRC63Q05C16 580 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 EGFEM1PQ0D2K5 195 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 EBI3Q14213 229 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 AANATQ16613 207 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 LDLRAP1Q5SW96 308 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 OR8G2PQ6IF36 304 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SULT1C3Q6IMI6 304 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 RAB12Q6IQ22 244 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SCYL2Q6P3W7 929 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 CERS5Q8N5B7 392 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 BCORP1Q8N888 145 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 LINC01555Q8NAE3 123 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 GIPC3Q8TF64 312 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 VSTM2LQ96N03 204 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 POLR3FQ9H1D9 316 aaPredicted RBP2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 DBNDD1Q9H9R9 158 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 MARCH5Q9NX47 278 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 UTP6Q9NYH9 597 aaKnown RBP2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 CYTH4Q9UIA0 394 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 FOXJ3Q9UPW0 622 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 NEU3Q9UQ49 428 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 RNF6Q9Y252 685 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 USP16Q9Y5T5 823 aa2.29□□□□□ -2.04
UPP2-IT1-201ENST00000439185 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SMIM28A0A1B0GU29 152 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 FAM230AA0A1W2PPH8 454 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 DFNA5O60443 496 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 STX11O75558 287 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TIMP1P01033 207 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TGFAP01135 160 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ANXA3P12429 323 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 GCFC2P16383 781 aaKnown RBP2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ATP5A1P25705 553 aaKnown RBP2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ATP6V1E1P36543 226 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 KIR2DS2P43631 304 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ASMTP46597 345 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 ATXN3P54252 364 aaPredicted RBP2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 BDH1Q02338 343 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 HERPUD1Q15011 391 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SHHQ15465 462 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TMEM52BQ4KMG9 183 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 IL34Q6ZMJ4 242 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 DNM1P46Q6ZS02 220 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 RBM43Q6ZSC3 357 aaKnown RBP2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 OR2T33Q8NG76 320 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TRUB1Q8WWH5 349 aaKnown RBP2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 CCDC47Q96A33 483 aaKnown RBP2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 STARD4Q96DR4 205 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SDSLQ96GA7 329 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TMEM237Q96Q45 408 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 SLC30A2Q9BRI3 323 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 TBCDQ9BTW9 1192 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 RAB17Q9H0T7 212 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 OR51J1Q9H342 316 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 PPDPFQ9H3Y8 114 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 FANCFQ9NPI8 374 aa2.28□□□□□ -2.04
UPP2-IT1-201ENST00000439185 YAE1D1Q9NRH1 226 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms