RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 FAM9CQ8IZT9 166 aa12.65□□□□□ -0.38
LINC01088-201ENST00000437737 AMBRA1Q9C0C7 1298 aa12.65□□□□□ -0.38
LINC01088-201ENST00000437737 TUBB1Q9H4B7 451 aa12.65□□□□□ -0.38
LINC01088-201ENST00000437737 WDR55Q9H6Y2 383 aaPredicted RBP12.65□□□□□ -0.38
LINC01088-201ENST00000437737 DDX31Q9H8H2 851 aaKnown RBP12.65□□□□□ -0.38
LINC01088-201ENST00000437737 VPS29Q9UBQ0 182 aa12.65□□□□□ -0.38
LINC01088-201ENST00000437737 TMED5Q9Y3A6 229 aa12.65□□□□□ -0.38
LINC01088-201ENST00000437737 NPIPB8E9PQR5 432 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 EBAG9O00559 213 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 SEC14L5O43304 696 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 REM1O75628 298 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 CPMP14384 443 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 PRPH2P23942 346 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 MAPK1P28482 360 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 ACVR1BP36896 505 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 CDKN1AP38936 164 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 SF3A3Q12874 501 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01088-201ENST00000437737 EXOSC7Q15024 291 aaKnown RBP12.64□□□□□ -0.39
LINC01088-201ENST00000437737 LSM12Q3MHD2 195 aaKnown RBP12.64□□□□□ -0.39
LINC01088-201ENST00000437737 OGFOD2Q6N063 350 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 FAM111BQ6SJ93 734 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 LARP4Q71RC2 724 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■□□□□ 8.9
LINC01088-201ENST00000437737 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 PPP1R36Q96LQ0 422 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 SERPINI1Q99574 410 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 EBF4Q9BQW3 602 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 SLCO5A1Q9H2Y9 848 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 AKTIPQ9H8T0 292 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 AHSPQ9NZD4 102 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 CDC42EP3Q9UKI2 254 aa12.64□□□□□ -0.39
LINC01088-201ENST00000437737 MRPS18CQ9Y3D5 142 aaKnown RBP12.64□□□□□ -0.39
LINC01088-201ENST00000437737 UBDO15205 165 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 ZIC3O60481 467 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 PEX11AO75192 247 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 SEC22BO75396 215 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 TNFRSF21O75509 655 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 PORP16435 677 aaPredicted RBP12.63□□□□□ -0.39
LINC01088-201ENST00000437737 NCF2P19878 526 aaPredicted RBP12.63□□□□□ -0.39
LINC01088-201ENST00000437737 S1PR1P21453 382 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 STX1BP61266 288 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 EMX2Q04743 252 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 CUL3Q13618 768 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 PON3Q15166 354 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 GSTA3Q16772 222 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 SPDYAQ5MJ70 313 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 RAET1LQ5VY80 246 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 ALKBH2Q6NS38 261 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 PPP4R4Q6NUP7 873 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 Q6ZSR9 355 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 OR4K17Q8NGC6 315 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 TMBIM1Q969X1 311 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 C3orf30Q96M34 536 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 COL21A1Q96P44 957 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 OR52B2Q96RD2 323 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 TMEM204Q9BSN7 226 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 FARSBQ9NSD9 589 aaKnown RBP12.63□□□□□ -0.39
LINC01088-201ENST00000437737 TMEM45AQ9NWC5 275 aa12.63□□□□□ -0.39
LINC01088-201ENST00000437737 OR6C70A6NIJ9 312 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 H0YC42 278 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 OVOL3O00110 214 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 LSM1O15116 133 aaKnown RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 SLC22A2O15244 555 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 CLOCKO15516 846 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 ADAM11O75078 769 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 JUNP05412 331 aaKnown RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 IDO1P14902 403 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 HTR6P50406 440 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 ATP4BP51164 291 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 SUCLG1P53597 346 aaKnown RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 TPD52P55327 224 aaPredicted RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 DSCR4P56555 118 aaPredicted RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 B3GALT5-AS1P59052 145 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 PRICKLE4Q2TBC4 344 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 SPIN4Q56A73 249 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 TCHHL1Q5QJ38 904 aaPredicted RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 C6orf136Q5SQH8 315 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 FAM214BQ7L5A3 538 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 FNDC5Q8NAU1 212 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 OR52R1Q8NGF1 315 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 BEX2Q9BXY8 128 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 ACPTQ9BZG2 426 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 ACTR6Q9GZN1 396 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 LRTM1Q9HBL6 345 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 MAT2BQ9NZL9 334 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
LINC01088-201ENST00000437737 PRODH2Q9UF12 536 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 SLC12A4Q9UP95 1085 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 LIPT1Q9Y234 373 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 ZNF175Q9Y473 711 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 CCL27Q9Y4X3 112 aa12.62□□□□□ -0.39
LINC01088-201ENST00000437737 E9PBE3 544 aa12.61□□□□□ -0.39
LINC01088-201ENST00000437737 H3BML4 177 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms